Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx54Q8K4L0 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx54Q8K4L0 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx54Q8K4L0 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx54Q8K4L0 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx54Q8K4L0 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx54Q8K4L0 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx54Q8K4L0 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx54Q8K4L0 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Ddx54Q8K4L0 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Ddx54Q8K4L0 Gm8531-201ENSMUST00000188319 893 ntBASIC16.28■□□□□ 0.2
Ddx54Q8K4L0 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC16.28■□□□□ 0.2
Ddx54Q8K4L0 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Ddx54Q8K4L0 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC16.28■□□□□ 0.2
Ddx54Q8K4L0 Gm9797-202ENSMUST00000218003 294 ntBASIC16.28■□□□□ 0.2
Ddx54Q8K4L0 Gm3619-201ENSMUST00000219947 775 ntBASIC16.28■□□□□ 0.2
Ddx54Q8K4L0 Gm9661-201ENSMUST00000221611 1122 ntBASIC16.28■□□□□ 0.2
Ddx54Q8K4L0 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx54Q8K4L0 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx54Q8K4L0 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx54Q8K4L0 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Ddx54Q8K4L0 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx54Q8K4L0 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx54Q8K4L0 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx54Q8K4L0 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx54Q8K4L0 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx54Q8K4L0 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx54Q8K4L0 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx54Q8K4L0 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ddx54Q8K4L0 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ddx54Q8K4L0 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Ddx54Q8K4L0 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC16.27■□□□□ 0.2
Ddx54Q8K4L0 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ddx54Q8K4L0 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ddx54Q8K4L0 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ddx54Q8K4L0 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Ddx54Q8K4L0 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
Ddx54Q8K4L0 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ddx54Q8K4L0 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ddx54Q8K4L0 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ddx54Q8K4L0 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ddx54Q8K4L0 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Ddx54Q8K4L0 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ddx54Q8K4L0 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Ddx54Q8K4L0 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ddx54Q8K4L0 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ddx54Q8K4L0 Gm26286-201ENSMUST00000104166 134 ntBASIC16.27■□□□□ 0.2
Ddx54Q8K4L0 Gm25063-201ENSMUST00000104666 94 ntBASIC16.27■□□□□ 0.2
Ddx54Q8K4L0 Gm13394-201ENSMUST00000121658 1000 ntBASIC16.27■□□□□ 0.2
Ddx54Q8K4L0 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC16.27■□□□□ 0.2
Ddx54Q8K4L0 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ddx54Q8K4L0 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC16.27■□□□□ 0.2
Ddx54Q8K4L0 Gm44158-201ENSMUST00000203881 505 ntBASIC16.27■□□□□ 0.2
Ddx54Q8K4L0 AC166344.1-201ENSMUST00000223745 674 ntBASIC16.27■□□□□ 0.2
Ddx54Q8K4L0 AC134860.1-201ENSMUST00000224867 660 ntBASIC16.27■□□□□ 0.2
Ddx54Q8K4L0 CT009536.2-201ENSMUST00000225370 665 ntBASIC16.27■□□□□ 0.2
Ddx54Q8K4L0 AC102368.1-201ENSMUST00000227161 892 ntBASIC16.27■□□□□ 0.2
Ddx54Q8K4L0 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC16.27■□□□□ 0.19
Ddx54Q8K4L0 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ddx54Q8K4L0 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ddx54Q8K4L0 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Ddx54Q8K4L0 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ddx54Q8K4L0 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC16.26■□□□□ 0.19
Ddx54Q8K4L0 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC16.26■□□□□ 0.19
Ddx54Q8K4L0 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ddx54Q8K4L0 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ddx54Q8K4L0 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ddx54Q8K4L0 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ddx54Q8K4L0 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC16.26■□□□□ 0.19
Ddx54Q8K4L0 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Ddx54Q8K4L0 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC16.26■□□□□ 0.19
Ddx54Q8K4L0 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ddx54Q8K4L0 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Ddx54Q8K4L0 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC16.26■□□□□ 0.19
Ddx54Q8K4L0 Rprl1-201ENSMUST00000158050 327 ntBASIC16.26■□□□□ 0.19
Ddx54Q8K4L0 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ddx54Q8K4L0 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC16.26■□□□□ 0.19
Ddx54Q8K4L0 Gm29410-201ENSMUST00000188383 694 ntBASIC16.26■□□□□ 0.19
Ddx54Q8K4L0 Gm38228-201ENSMUST00000193169 1293 ntBASIC16.26■□□□□ 0.19
Ddx54Q8K4L0 Gm5100-201ENSMUST00000195631 589 ntBASIC16.26■□□□□ 0.19
Ddx54Q8K4L0 Gm18204-201ENSMUST00000209835 793 ntBASIC16.26■□□□□ 0.19
Ddx54Q8K4L0 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ddx54Q8K4L0 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC16.26■□□□□ 0.19
Ddx54Q8K4L0 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Ddx54Q8K4L0 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ddx54Q8K4L0 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ddx54Q8K4L0 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ddx54Q8K4L0 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ddx54Q8K4L0 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Ddx54Q8K4L0 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ddx54Q8K4L0 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ddx54Q8K4L0 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ddx54Q8K4L0 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ddx54Q8K4L0 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ddx54Q8K4L0 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Ddx54Q8K4L0 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Ddx54Q8K4L0 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ddx54Q8K4L0 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ddx54Q8K4L0 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ddx54Q8K4L0 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 84.6 ms