Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clrn1Q8K445 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Clrn1Q8K445 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Clrn1Q8K445 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.81□□□□□ -0.52
Clrn1Q8K445 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clrn1Q8K445 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clrn1Q8K445 Gm7789-202ENSMUST00000211273 1400 ntBASIC11.81□□□□□ -0.52
Clrn1Q8K445 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clrn1Q8K445 Gm23931-201ENSMUST00000103842 109 ntBASIC11.81□□□□□ -0.52
Clrn1Q8K445 Gm22018-201ENSMUST00000104357 131 ntBASIC11.81□□□□□ -0.52
Clrn1Q8K445 Gm5187-201ENSMUST00000117317 991 ntBASIC11.81□□□□□ -0.52
Clrn1Q8K445 Gm15703-201ENSMUST00000120250 880 ntBASIC11.81□□□□□ -0.52
Clrn1Q8K445 Gm11658-201ENSMUST00000120913 1008 ntBASIC11.81□□□□□ -0.52
Clrn1Q8K445 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC11.81□□□□□ -0.52
Clrn1Q8K445 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Clrn1Q8K445 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Clrn1Q8K445 Gm2467-201ENSMUST00000182266 1010 ntBASIC11.81□□□□□ -0.52
Clrn1Q8K445 Gm6981-201ENSMUST00000182467 1008 ntBASIC11.81□□□□□ -0.52
Clrn1Q8K445 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Clrn1Q8K445 Gm45880-201ENSMUST00000213041 853 ntBASIC11.81□□□□□ -0.52
Clrn1Q8K445 AC140406.1-201ENSMUST00000226481 465 ntBASIC11.81□□□□□ -0.52
Clrn1Q8K445 AC154462.2-201ENSMUST00000227519 370 ntBASIC11.81□□□□□ -0.52
Clrn1Q8K445 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Clrn1Q8K445 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clrn1Q8K445 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clrn1Q8K445 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clrn1Q8K445 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clrn1Q8K445 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clrn1Q8K445 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clrn1Q8K445 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clrn1Q8K445 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clrn1Q8K445 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clrn1Q8K445 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Clrn1Q8K445 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Clrn1Q8K445 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clrn1Q8K445 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clrn1Q8K445 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Clrn1Q8K445 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC11.8□□□□□ -0.52
Clrn1Q8K445 Gm27194-201ENSMUST00000175753 2936 ntBASIC11.8□□□□□ -0.52
Clrn1Q8K445 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Clrn1Q8K445 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Clrn1Q8K445 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC11.8□□□□□ -0.52
Clrn1Q8K445 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clrn1Q8K445 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clrn1Q8K445 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clrn1Q8K445 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clrn1Q8K445 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clrn1Q8K445 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Clrn1Q8K445 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clrn1Q8K445 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clrn1Q8K445 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clrn1Q8K445 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Clrn1Q8K445 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clrn1Q8K445 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.8□□□□□ -0.52
Clrn1Q8K445 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clrn1Q8K445 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Clrn1Q8K445 Gm12329-201ENSMUST00000120829 1007 ntBASIC11.8□□□□□ -0.52
Clrn1Q8K445 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Clrn1Q8K445 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC11.8□□□□□ -0.52
Clrn1Q8K445 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Clrn1Q8K445 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Clrn1Q8K445 Gm27572-201ENSMUST00000183702 255 ntBASIC11.8□□□□□ -0.52
Clrn1Q8K445 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC11.8□□□□□ -0.52
Clrn1Q8K445 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Clrn1Q8K445 Gm10371-202ENSMUST00000228010 1081 ntBASIC11.8□□□□□ -0.52
Clrn1Q8K445 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Clrn1Q8K445 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Clrn1Q8K445 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clrn1Q8K445 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Clrn1Q8K445 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Clrn1Q8K445 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clrn1Q8K445 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clrn1Q8K445 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Clrn1Q8K445 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clrn1Q8K445 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clrn1Q8K445 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Clrn1Q8K445 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Clrn1Q8K445 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Clrn1Q8K445 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clrn1Q8K445 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Clrn1Q8K445 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clrn1Q8K445 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clrn1Q8K445 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC11.79□□□□□ -0.52
Clrn1Q8K445 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Clrn1Q8K445 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Clrn1Q8K445 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Clrn1Q8K445 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Clrn1Q8K445 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Clrn1Q8K445 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Clrn1Q8K445 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Clrn1Q8K445 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC11.79□□□□□ -0.52
Clrn1Q8K445 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Clrn1Q8K445 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Clrn1Q8K445 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Clrn1Q8K445 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Clrn1Q8K445 Gm11964-201ENSMUST00000120982 444 ntBASIC11.79□□□□□ -0.52
Clrn1Q8K445 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC11.79□□□□□ -0.52
Clrn1Q8K445 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.79□□□□□ -0.52
Clrn1Q8K445 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Clrn1Q8K445 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms