Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc38Q8CDN8 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc38Q8CDN8 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc38Q8CDN8 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc38Q8CDN8 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc38Q8CDN8 Gm11478-201ENSMUST00000117851 599 ntBASIC13.94□□□□□ -0.18
Ccdc38Q8CDN8 Gm13722-201ENSMUST00000117964 3066 ntBASIC13.94□□□□□ -0.18
Ccdc38Q8CDN8 Gm11964-201ENSMUST00000120982 444 ntBASIC13.94□□□□□ -0.18
Ccdc38Q8CDN8 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC13.94□□□□□ -0.18
Ccdc38Q8CDN8 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC13.94□□□□□ -0.18
Ccdc38Q8CDN8 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc38Q8CDN8 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC13.94□□□□□ -0.18
Ccdc38Q8CDN8 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc38Q8CDN8 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC13.94□□□□□ -0.18
Ccdc38Q8CDN8 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC13.94□□□□□ -0.18
Ccdc38Q8CDN8 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc38Q8CDN8 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc38Q8CDN8 AC022775.2-201ENSMUST00000227885 646 ntBASIC13.94□□□□□ -0.18
Ccdc38Q8CDN8 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc38Q8CDN8 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Ccdc38Q8CDN8 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Ccdc38Q8CDN8 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc38Q8CDN8 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC13.94□□□□□ -0.18
Ccdc38Q8CDN8 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC13.94□□□□□ -0.18
Ccdc38Q8CDN8 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc38Q8CDN8 Gm19817-201ENSMUST00000199764 2132 ntBASIC13.94□□□□□ -0.18
Ccdc38Q8CDN8 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc38Q8CDN8 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc38Q8CDN8 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc38Q8CDN8 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc38Q8CDN8 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc38Q8CDN8 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Ccdc38Q8CDN8 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc38Q8CDN8 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc38Q8CDN8 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc38Q8CDN8 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc38Q8CDN8 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc38Q8CDN8 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC13.93□□□□□ -0.18
Ccdc38Q8CDN8 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc38Q8CDN8 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc38Q8CDN8 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC13.93□□□□□ -0.18
Ccdc38Q8CDN8 Gm5859-201ENSMUST00000165401 2324 ntBASIC13.93□□□□□ -0.18
Ccdc38Q8CDN8 Gm8228-201ENSMUST00000189949 2192 ntBASIC13.93□□□□□ -0.18
Ccdc38Q8CDN8 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc38Q8CDN8 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc38Q8CDN8 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc38Q8CDN8 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc38Q8CDN8 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc38Q8CDN8 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc38Q8CDN8 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc38Q8CDN8 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Ccdc38Q8CDN8 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc38Q8CDN8 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc38Q8CDN8 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc38Q8CDN8 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Ccdc38Q8CDN8 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC13.93□□□□□ -0.18
Ccdc38Q8CDN8 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Ccdc38Q8CDN8 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc38Q8CDN8 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Ccdc38Q8CDN8 Gm10268-201ENSMUST00000085340 555 ntBASIC13.93□□□□□ -0.18
Ccdc38Q8CDN8 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc38Q8CDN8 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc38Q8CDN8 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc38Q8CDN8 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc38Q8CDN8 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Ccdc38Q8CDN8 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Ccdc38Q8CDN8 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Ccdc38Q8CDN8 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc38Q8CDN8 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc38Q8CDN8 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC13.93□□□□□ -0.18
Ccdc38Q8CDN8 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Ccdc38Q8CDN8 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc38Q8CDN8 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc38Q8CDN8 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc38Q8CDN8 AC126262.1-201ENSMUST00000221802 1904 ntBASIC13.92□□□□□ -0.18
Ccdc38Q8CDN8 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Ccdc38Q8CDN8 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc38Q8CDN8 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc38Q8CDN8 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc38Q8CDN8 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc38Q8CDN8 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc38Q8CDN8 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
Ccdc38Q8CDN8 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc38Q8CDN8 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc38Q8CDN8 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC13.92□□□□□ -0.18
Ccdc38Q8CDN8 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc38Q8CDN8 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc38Q8CDN8 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc38Q8CDN8 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC13.92□□□□□ -0.18
Ccdc38Q8CDN8 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC13.92□□□□□ -0.18
Ccdc38Q8CDN8 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC13.92□□□□□ -0.18
Ccdc38Q8CDN8 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc38Q8CDN8 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC13.92□□□□□ -0.18
Ccdc38Q8CDN8 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Ccdc38Q8CDN8 Gm7224-201ENSMUST00000121359 2066 ntBASIC13.92□□□□□ -0.18
Ccdc38Q8CDN8 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc38Q8CDN8 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Ccdc38Q8CDN8 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc38Q8CDN8 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc38Q8CDN8 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms