Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Alx1Q8C8B0 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Alx1Q8C8B0 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Alx1Q8C8B0 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Alx1Q8C8B0 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC14.56□□□□□ -0.08
Alx1Q8C8B0 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC14.56□□□□□ -0.08
Alx1Q8C8B0 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Alx1Q8C8B0 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Alx1Q8C8B0 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Alx1Q8C8B0 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC14.56□□□□□ -0.08
Alx1Q8C8B0 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Alx1Q8C8B0 Gm4760-201ENSMUST00000119663 1030 ntBASIC14.56□□□□□ -0.08
Alx1Q8C8B0 Gm12749-201ENSMUST00000122138 1159 ntBASIC14.56□□□□□ -0.08
Alx1Q8C8B0 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Alx1Q8C8B0 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Alx1Q8C8B0 Gm26083-201ENSMUST00000157904 193 ntBASIC14.56□□□□□ -0.08
Alx1Q8C8B0 Gm44967-201ENSMUST00000207047 631 ntBASIC14.56□□□□□ -0.08
Alx1Q8C8B0 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC14.56□□□□□ -0.08
Alx1Q8C8B0 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC14.56□□□□□ -0.08
Alx1Q8C8B0 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC14.56□□□□□ -0.08
Alx1Q8C8B0 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC14.56□□□□□ -0.08
Alx1Q8C8B0 AC154252.2-201ENSMUST00000223593 767 ntBASIC14.56□□□□□ -0.08
Alx1Q8C8B0 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Alx1Q8C8B0 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Alx1Q8C8B0 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Alx1Q8C8B0 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Alx1Q8C8B0 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Alx1Q8C8B0 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Alx1Q8C8B0 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Alx1Q8C8B0 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Alx1Q8C8B0 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Alx1Q8C8B0 Gm10782-202ENSMUST00000223775 1480 ntBASIC14.56□□□□□ -0.08
Alx1Q8C8B0 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Alx1Q8C8B0 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Alx1Q8C8B0 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Alx1Q8C8B0 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Alx1Q8C8B0 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC14.56□□□□□ -0.08
Alx1Q8C8B0 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC14.56□□□□□ -0.08
Alx1Q8C8B0 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Alx1Q8C8B0 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Alx1Q8C8B0 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Alx1Q8C8B0 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Alx1Q8C8B0 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Alx1Q8C8B0 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Alx1Q8C8B0 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Alx1Q8C8B0 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Alx1Q8C8B0 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Alx1Q8C8B0 Gm12012-201ENSMUST00000118857 1066 ntBASIC14.55□□□□□ -0.08
Alx1Q8C8B0 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Alx1Q8C8B0 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC14.55□□□□□ -0.08
Alx1Q8C8B0 Gm38000-201ENSMUST00000192390 1215 ntBASIC14.55□□□□□ -0.08
Alx1Q8C8B0 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Alx1Q8C8B0 Gm19187-201ENSMUST00000206781 892 ntBASIC14.55□□□□□ -0.08
Alx1Q8C8B0 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Alx1Q8C8B0 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC14.55□□□□□ -0.08
Alx1Q8C8B0 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Alx1Q8C8B0 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Alx1Q8C8B0 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Alx1Q8C8B0 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Alx1Q8C8B0 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Alx1Q8C8B0 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Alx1Q8C8B0 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Alx1Q8C8B0 Ntrk2-204ENSMUST00000224259 3049 ntBASIC14.55□□□□□ -0.08
Alx1Q8C8B0 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
Alx1Q8C8B0 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Alx1Q8C8B0 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Alx1Q8C8B0 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Alx1Q8C8B0 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Alx1Q8C8B0 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Alx1Q8C8B0 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Alx1Q8C8B0 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Alx1Q8C8B0 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Alx1Q8C8B0 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Alx1Q8C8B0 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Alx1Q8C8B0 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC14.54□□□□□ -0.08
Alx1Q8C8B0 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Alx1Q8C8B0 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC14.54□□□□□ -0.08
Alx1Q8C8B0 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC14.54□□□□□ -0.08
Alx1Q8C8B0 Gm12715-201ENSMUST00000121430 1128 ntBASIC14.54□□□□□ -0.08
Alx1Q8C8B0 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC14.54□□□□□ -0.08
Alx1Q8C8B0 Gm9230-201ENSMUST00000188228 532 ntBASIC14.54□□□□□ -0.08
Alx1Q8C8B0 Gm38241-201ENSMUST00000192641 898 ntBASIC14.54□□□□□ -0.08
Alx1Q8C8B0 Gm4857-201ENSMUST00000192718 785 ntBASIC14.54□□□□□ -0.08
Alx1Q8C8B0 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Alx1Q8C8B0 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC14.54□□□□□ -0.08
Alx1Q8C8B0 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC14.54□□□□□ -0.08
Alx1Q8C8B0 Dhrs4-202ENSMUST00000226168 828 ntBASIC14.54□□□□□ -0.08
Alx1Q8C8B0 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Alx1Q8C8B0 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC14.54□□□□□ -0.08
Alx1Q8C8B0 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Alx1Q8C8B0 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Alx1Q8C8B0 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC14.54□□□□□ -0.08
Alx1Q8C8B0 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Alx1Q8C8B0 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Alx1Q8C8B0 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Alx1Q8C8B0 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Alx1Q8C8B0 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Alx1Q8C8B0 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Alx1Q8C8B0 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Alx1Q8C8B0 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms