Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Usp44Q8C2S0 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Usp44Q8C2S0 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Usp44Q8C2S0 Gm12241-201ENSMUST00000118330 726 ntBASIC14.62□□□□□ -0.07
Usp44Q8C2S0 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
Usp44Q8C2S0 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Usp44Q8C2S0 Gm7895-201ENSMUST00000187459 1173 ntBASIC14.62□□□□□ -0.07
Usp44Q8C2S0 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Usp44Q8C2S0 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Usp44Q8C2S0 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC14.62□□□□□ -0.07
Usp44Q8C2S0 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC14.62□□□□□ -0.07
Usp44Q8C2S0 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Usp44Q8C2S0 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Usp44Q8C2S0 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Usp44Q8C2S0 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Usp44Q8C2S0 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Usp44Q8C2S0 Gm13142-201ENSMUST00000117213 1453 ntBASIC14.62□□□□□ -0.07
Usp44Q8C2S0 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Usp44Q8C2S0 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Usp44Q8C2S0 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Usp44Q8C2S0 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Usp44Q8C2S0 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
Usp44Q8C2S0 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
Usp44Q8C2S0 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Usp44Q8C2S0 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Usp44Q8C2S0 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Usp44Q8C2S0 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
Usp44Q8C2S0 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC14.61□□□□□ -0.07
Usp44Q8C2S0 Gm37269-201ENSMUST00000193906 1891 ntBASIC14.61□□□□□ -0.07
Usp44Q8C2S0 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Usp44Q8C2S0 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Usp44Q8C2S0 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Usp44Q8C2S0 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Usp44Q8C2S0 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Usp44Q8C2S0 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC14.61□□□□□ -0.07
Usp44Q8C2S0 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Usp44Q8C2S0 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Usp44Q8C2S0 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Usp44Q8C2S0 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Usp44Q8C2S0 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Usp44Q8C2S0 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Usp44Q8C2S0 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Usp44Q8C2S0 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC14.61□□□□□ -0.07
Usp44Q8C2S0 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Usp44Q8C2S0 Gm11222-201ENSMUST00000119005 738 ntBASIC14.61□□□□□ -0.07
Usp44Q8C2S0 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Usp44Q8C2S0 Gm2991-201ENSMUST00000173338 480 ntBASIC14.61□□□□□ -0.07
Usp44Q8C2S0 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Usp44Q8C2S0 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC14.61□□□□□ -0.07
Usp44Q8C2S0 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC14.61□□□□□ -0.07
Usp44Q8C2S0 Gm21769-201ENSMUST00000211922 111 ntBASIC14.61□□□□□ -0.07
Usp44Q8C2S0 Gm30285-201ENSMUST00000214614 422 ntBASIC14.61□□□□□ -0.07
Usp44Q8C2S0 Gm8712-201ENSMUST00000221090 701 ntBASIC14.61□□□□□ -0.07
Usp44Q8C2S0 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC14.61□□□□□ -0.07
Usp44Q8C2S0 Cts7-204ENSMUST00000225321 1257 ntBASIC14.61□□□□□ -0.07
Usp44Q8C2S0 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Usp44Q8C2S0 Gm17383-201ENSMUST00000078739 1041 ntBASIC14.61□□□□□ -0.07
Usp44Q8C2S0 Gm4864-201ENSMUST00000219894 1461 ntBASIC14.61□□□□□ -0.07
Usp44Q8C2S0 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC14.61□□□□□ -0.07
Usp44Q8C2S0 Gm11661-201ENSMUST00000121761 1327 ntBASIC14.61□□□□□ -0.07
Usp44Q8C2S0 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Usp44Q8C2S0 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Usp44Q8C2S0 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC14.61□□□□□ -0.07
Usp44Q8C2S0 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Usp44Q8C2S0 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Usp44Q8C2S0 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Usp44Q8C2S0 AC117194.1-201ENSMUST00000224847 3002 ntBASIC14.6□□□□□ -0.07
Usp44Q8C2S0 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Usp44Q8C2S0 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Usp44Q8C2S0 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Usp44Q8C2S0 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Usp44Q8C2S0 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Usp44Q8C2S0 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Usp44Q8C2S0 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC14.6□□□□□ -0.07
Usp44Q8C2S0 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Usp44Q8C2S0 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC14.6□□□□□ -0.07
Usp44Q8C2S0 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Usp44Q8C2S0 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Usp44Q8C2S0 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Usp44Q8C2S0 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Usp44Q8C2S0 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC14.6□□□□□ -0.07
Usp44Q8C2S0 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Usp44Q8C2S0 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Usp44Q8C2S0 Gm14132-201ENSMUST00000117188 1719 ntBASIC14.6□□□□□ -0.07
Usp44Q8C2S0 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Usp44Q8C2S0 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Usp44Q8C2S0 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Usp44Q8C2S0 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Usp44Q8C2S0 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Usp44Q8C2S0 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Usp44Q8C2S0 Gm18222-201ENSMUST00000202416 1387 ntBASIC14.6□□□□□ -0.07
Usp44Q8C2S0 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Usp44Q8C2S0 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Usp44Q8C2S0 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Usp44Q8C2S0 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Usp44Q8C2S0 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Usp44Q8C2S0 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Usp44Q8C2S0 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Usp44Q8C2S0 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Usp44Q8C2S0 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms