Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Sh3rf3Q8C120 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sh3rf3Q8C120 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sh3rf3Q8C120 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sh3rf3Q8C120 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sh3rf3Q8C120 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.04□□□□□ -0.32
Sh3rf3Q8C120 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sh3rf3Q8C120 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sh3rf3Q8C120 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sh3rf3Q8C120 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Sh3rf3Q8C120 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sh3rf3Q8C120 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sh3rf3Q8C120 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sh3rf3Q8C120 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sh3rf3Q8C120 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sh3rf3Q8C120 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sh3rf3Q8C120 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Sh3rf3Q8C120 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sh3rf3Q8C120 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sh3rf3Q8C120 Gm27177-202ENSMUST00000183514 2703 ntBASIC13.04□□□□□ -0.32
Sh3rf3Q8C120 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sh3rf3Q8C120 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sh3rf3Q8C120 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC13.04□□□□□ -0.32
Sh3rf3Q8C120 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sh3rf3Q8C120 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sh3rf3Q8C120 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC13.04□□□□□ -0.32
Sh3rf3Q8C120 Gm37008-201ENSMUST00000195712 319 ntBASIC13.04□□□□□ -0.32
Sh3rf3Q8C120 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC13.04□□□□□ -0.32
Sh3rf3Q8C120 AC166349.1-201ENSMUST00000220866 695 ntBASIC13.04□□□□□ -0.32
Sh3rf3Q8C120 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sh3rf3Q8C120 Gm22058-201ENSMUST00000083393 310 ntBASIC13.04□□□□□ -0.32
Sh3rf3Q8C120 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sh3rf3Q8C120 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sh3rf3Q8C120 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sh3rf3Q8C120 AC159195.1-201ENSMUST00000225867 2086 ntBASIC13.04□□□□□ -0.32
Sh3rf3Q8C120 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sh3rf3Q8C120 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sh3rf3Q8C120 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sh3rf3Q8C120 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sh3rf3Q8C120 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sh3rf3Q8C120 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sh3rf3Q8C120 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Sh3rf3Q8C120 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sh3rf3Q8C120 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sh3rf3Q8C120 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sh3rf3Q8C120 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sh3rf3Q8C120 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sh3rf3Q8C120 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Sh3rf3Q8C120 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sh3rf3Q8C120 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sh3rf3Q8C120 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sh3rf3Q8C120 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sh3rf3Q8C120 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sh3rf3Q8C120 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sh3rf3Q8C120 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sh3rf3Q8C120 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sh3rf3Q8C120 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC13.03□□□□□ -0.32
Sh3rf3Q8C120 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sh3rf3Q8C120 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sh3rf3Q8C120 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC13.03□□□□□ -0.32
Sh3rf3Q8C120 Gm5863-201ENSMUST00000121760 1008 ntBASIC13.03□□□□□ -0.32
Sh3rf3Q8C120 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sh3rf3Q8C120 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sh3rf3Q8C120 Gm5850-201ENSMUST00000192923 1206 ntBASIC13.03□□□□□ -0.32
Sh3rf3Q8C120 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC13.03□□□□□ -0.32
Sh3rf3Q8C120 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC13.03□□□□□ -0.32
Sh3rf3Q8C120 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sh3rf3Q8C120 AC132317.1-201ENSMUST00000227227 962 ntBASIC13.03□□□□□ -0.32
Sh3rf3Q8C120 AC108416.1-202ENSMUST00000228927 1201 ntBASIC13.03□□□□□ -0.32
Sh3rf3Q8C120 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sh3rf3Q8C120 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Sh3rf3Q8C120 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sh3rf3Q8C120 Gm37324-201ENSMUST00000194500 4504 ntBASIC13.03□□□□□ -0.32
Sh3rf3Q8C120 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sh3rf3Q8C120 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sh3rf3Q8C120 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sh3rf3Q8C120 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Sh3rf3Q8C120 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sh3rf3Q8C120 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sh3rf3Q8C120 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sh3rf3Q8C120 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sh3rf3Q8C120 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sh3rf3Q8C120 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sh3rf3Q8C120 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sh3rf3Q8C120 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
Sh3rf3Q8C120 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sh3rf3Q8C120 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sh3rf3Q8C120 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sh3rf3Q8C120 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Sh3rf3Q8C120 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sh3rf3Q8C120 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Sh3rf3Q8C120 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sh3rf3Q8C120 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC13.02□□□□□ -0.33
Sh3rf3Q8C120 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sh3rf3Q8C120 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Sh3rf3Q8C120 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC13.02□□□□□ -0.33
Sh3rf3Q8C120 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC13.02□□□□□ -0.33
Sh3rf3Q8C120 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sh3rf3Q8C120 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sh3rf3Q8C120 Gm5187-201ENSMUST00000117317 991 ntBASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms