Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC13.88□□□□□ -0.19
Trim47Q8C0E3 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim47Q8C0E3 Mir877-201ENSMUST00000104738 85 ntBASIC13.88□□□□□ -0.19
Trim47Q8C0E3 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trim47Q8C0E3 Gm15808-201ENSMUST00000119046 604 ntBASIC13.88□□□□□ -0.19
Trim47Q8C0E3 Gm12962-202ENSMUST00000144212 691 ntTSL 2 BASIC13.88□□□□□ -0.19
Trim47Q8C0E3 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trim47Q8C0E3 Gm8494-201ENSMUST00000178171 1233 ntBASIC13.88□□□□□ -0.19
Trim47Q8C0E3 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Trim47Q8C0E3 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC13.88□□□□□ -0.19
Trim47Q8C0E3 Gm8885-201ENSMUST00000189382 598 ntBASIC13.88□□□□□ -0.19
Trim47Q8C0E3 Gm38000-201ENSMUST00000192390 1215 ntBASIC13.88□□□□□ -0.19
Trim47Q8C0E3 Gm18615-201ENSMUST00000222919 1031 ntBASIC13.88□□□□□ -0.19
Trim47Q8C0E3 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim47Q8C0E3 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim47Q8C0E3 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim47Q8C0E3 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim47Q8C0E3 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim47Q8C0E3 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim47Q8C0E3 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim47Q8C0E3 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim47Q8C0E3 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trim47Q8C0E3 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim47Q8C0E3 Gm44207-201ENSMUST00000204568 1424 ntBASIC13.88□□□□□ -0.19
Trim47Q8C0E3 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim47Q8C0E3 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC13.88□□□□□ -0.19
Trim47Q8C0E3 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Trim47Q8C0E3 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim47Q8C0E3 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trim47Q8C0E3 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim47Q8C0E3 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC13.88□□□□□ -0.19
Trim47Q8C0E3 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trim47Q8C0E3 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trim47Q8C0E3 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trim47Q8C0E3 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trim47Q8C0E3 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim47Q8C0E3 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trim47Q8C0E3 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Trim47Q8C0E3 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
Trim47Q8C0E3 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC13.87□□□□□ -0.19
Trim47Q8C0E3 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim47Q8C0E3 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trim47Q8C0E3 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim47Q8C0E3 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
Trim47Q8C0E3 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim47Q8C0E3 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim47Q8C0E3 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trim47Q8C0E3 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC13.87□□□□□ -0.19
Trim47Q8C0E3 Gm12715-201ENSMUST00000121430 1128 ntBASIC13.87□□□□□ -0.19
Trim47Q8C0E3 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trim47Q8C0E3 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trim47Q8C0E3 Gm3096-201ENSMUST00000185770 364 ntBASIC13.87□□□□□ -0.19
Trim47Q8C0E3 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC13.87□□□□□ -0.19
Trim47Q8C0E3 Gm44967-201ENSMUST00000207047 631 ntBASIC13.87□□□□□ -0.19
Trim47Q8C0E3 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC13.87□□□□□ -0.19
Trim47Q8C0E3 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC13.87□□□□□ -0.19
Trim47Q8C0E3 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Trim47Q8C0E3 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim47Q8C0E3 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Trim47Q8C0E3 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim47Q8C0E3 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim47Q8C0E3 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim47Q8C0E3 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
Trim47Q8C0E3 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trim47Q8C0E3 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim47Q8C0E3 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trim47Q8C0E3 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Trim47Q8C0E3 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim47Q8C0E3 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trim47Q8C0E3 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim47Q8C0E3 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trim47Q8C0E3 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim47Q8C0E3 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim47Q8C0E3 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim47Q8C0E3 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim47Q8C0E3 AC126262.1-201ENSMUST00000221802 1904 ntBASIC13.86□□□□□ -0.19
Trim47Q8C0E3 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim47Q8C0E3 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim47Q8C0E3 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim47Q8C0E3 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Trim47Q8C0E3 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim47Q8C0E3 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trim47Q8C0E3 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim47Q8C0E3 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim47Q8C0E3 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Trim47Q8C0E3 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Trim47Q8C0E3 Gm20633-201ENSMUST00000176742 2831 ntBASIC13.86□□□□□ -0.19
Trim47Q8C0E3 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Trim47Q8C0E3 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
Trim47Q8C0E3 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trim47Q8C0E3 Gm12012-201ENSMUST00000118857 1066 ntBASIC13.86□□□□□ -0.19
Trim47Q8C0E3 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trim47Q8C0E3 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trim47Q8C0E3 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trim47Q8C0E3 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Trim47Q8C0E3 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC13.86□□□□□ -0.19
Trim47Q8C0E3 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Trim47Q8C0E3 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim47Q8C0E3 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim47Q8C0E3 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms