Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trub1Q8C0D0 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trub1Q8C0D0 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trub1Q8C0D0 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trub1Q8C0D0 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Trub1Q8C0D0 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trub1Q8C0D0 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Trub1Q8C0D0 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trub1Q8C0D0 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trub1Q8C0D0 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trub1Q8C0D0 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Trub1Q8C0D0 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.89□□□□□ -0.35
Trub1Q8C0D0 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trub1Q8C0D0 Gm5187-201ENSMUST00000117317 991 ntBASIC12.89□□□□□ -0.35
Trub1Q8C0D0 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.89□□□□□ -0.35
Trub1Q8C0D0 Gm13316-201ENSMUST00000140537 691 ntBASIC12.89□□□□□ -0.35
Trub1Q8C0D0 Gm23119-201ENSMUST00000158610 140 ntBASIC12.89□□□□□ -0.35
Trub1Q8C0D0 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Trub1Q8C0D0 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trub1Q8C0D0 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.89□□□□□ -0.35
Trub1Q8C0D0 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Trub1Q8C0D0 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trub1Q8C0D0 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Trub1Q8C0D0 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
Trub1Q8C0D0 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trub1Q8C0D0 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Trub1Q8C0D0 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trub1Q8C0D0 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Trub1Q8C0D0 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.89□□□□□ -0.35
Trub1Q8C0D0 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.89□□□□□ -0.35
Trub1Q8C0D0 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trub1Q8C0D0 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trub1Q8C0D0 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trub1Q8C0D0 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Trub1Q8C0D0 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trub1Q8C0D0 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Trub1Q8C0D0 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trub1Q8C0D0 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.89□□□□□ -0.35
Trub1Q8C0D0 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trub1Q8C0D0 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trub1Q8C0D0 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trub1Q8C0D0 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trub1Q8C0D0 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.89□□□□□ -0.35
Trub1Q8C0D0 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trub1Q8C0D0 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trub1Q8C0D0 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trub1Q8C0D0 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
Trub1Q8C0D0 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trub1Q8C0D0 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trub1Q8C0D0 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trub1Q8C0D0 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trub1Q8C0D0 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.88□□□□□ -0.35
Trub1Q8C0D0 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trub1Q8C0D0 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trub1Q8C0D0 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.88□□□□□ -0.35
Trub1Q8C0D0 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC12.88□□□□□ -0.35
Trub1Q8C0D0 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.88□□□□□ -0.35
Trub1Q8C0D0 Gm39404-201ENSMUST00000216350 313 ntBASIC12.88□□□□□ -0.35
Trub1Q8C0D0 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trub1Q8C0D0 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.88□□□□□ -0.35
Trub1Q8C0D0 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trub1Q8C0D0 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trub1Q8C0D0 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trub1Q8C0D0 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trub1Q8C0D0 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trub1Q8C0D0 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trub1Q8C0D0 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trub1Q8C0D0 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trub1Q8C0D0 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trub1Q8C0D0 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trub1Q8C0D0 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trub1Q8C0D0 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trub1Q8C0D0 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trub1Q8C0D0 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trub1Q8C0D0 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trub1Q8C0D0 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trub1Q8C0D0 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trub1Q8C0D0 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trub1Q8C0D0 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trub1Q8C0D0 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trub1Q8C0D0 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trub1Q8C0D0 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trub1Q8C0D0 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trub1Q8C0D0 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trub1Q8C0D0 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trub1Q8C0D0 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Trub1Q8C0D0 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trub1Q8C0D0 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.87□□□□□ -0.35
Trub1Q8C0D0 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trub1Q8C0D0 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trub1Q8C0D0 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.87□□□□□ -0.35
Trub1Q8C0D0 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trub1Q8C0D0 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.87□□□□□ -0.35
Trub1Q8C0D0 Gm38158-201ENSMUST00000194617 339 ntBASIC12.87□□□□□ -0.35
Trub1Q8C0D0 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC12.87□□□□□ -0.35
Trub1Q8C0D0 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC12.87□□□□□ -0.35
Trub1Q8C0D0 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
Trub1Q8C0D0 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trub1Q8C0D0 Gm25857-201ENSMUST00000082788 129 ntBASIC12.87□□□□□ -0.35
Trub1Q8C0D0 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms