Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Sh3rf2Q8BZT2 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sh3rf2Q8BZT2 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.69□□□□□ -0.38
Sh3rf2Q8BZT2 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sh3rf2Q8BZT2 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sh3rf2Q8BZT2 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sh3rf2Q8BZT2 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sh3rf2Q8BZT2 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sh3rf2Q8BZT2 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.69□□□□□ -0.38
Sh3rf2Q8BZT2 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.69□□□□□ -0.38
Sh3rf2Q8BZT2 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sh3rf2Q8BZT2 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sh3rf2Q8BZT2 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Sh3rf2Q8BZT2 Gm7857-201ENSMUST00000117957 358 ntBASIC12.69□□□□□ -0.38
Sh3rf2Q8BZT2 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Sh3rf2Q8BZT2 Gm12217-201ENSMUST00000118858 696 ntBASIC12.69□□□□□ -0.38
Sh3rf2Q8BZT2 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.69□□□□□ -0.38
Sh3rf2Q8BZT2 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC12.69□□□□□ -0.38
Sh3rf2Q8BZT2 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sh3rf2Q8BZT2 Mir6927-201ENSMUST00000184494 71 ntBASIC12.69□□□□□ -0.38
Sh3rf2Q8BZT2 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sh3rf2Q8BZT2 Gm45598-202ENSMUST00000210719 986 ntBASIC12.69□□□□□ -0.38
Sh3rf2Q8BZT2 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sh3rf2Q8BZT2 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sh3rf2Q8BZT2 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sh3rf2Q8BZT2 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sh3rf2Q8BZT2 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Sh3rf2Q8BZT2 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC12.69□□□□□ -0.38
Sh3rf2Q8BZT2 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sh3rf2Q8BZT2 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sh3rf2Q8BZT2 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.69□□□□□ -0.38
Sh3rf2Q8BZT2 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sh3rf2Q8BZT2 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sh3rf2Q8BZT2 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Sh3rf2Q8BZT2 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sh3rf2Q8BZT2 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sh3rf2Q8BZT2 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sh3rf2Q8BZT2 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Sh3rf2Q8BZT2 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sh3rf2Q8BZT2 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sh3rf2Q8BZT2 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Sh3rf2Q8BZT2 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Sh3rf2Q8BZT2 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sh3rf2Q8BZT2 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sh3rf2Q8BZT2 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sh3rf2Q8BZT2 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Sh3rf2Q8BZT2 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sh3rf2Q8BZT2 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sh3rf2Q8BZT2 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sh3rf2Q8BZT2 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sh3rf2Q8BZT2 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sh3rf2Q8BZT2 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sh3rf2Q8BZT2 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sh3rf2Q8BZT2 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Sh3rf2Q8BZT2 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Sh3rf2Q8BZT2 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.68□□□□□ -0.38
Sh3rf2Q8BZT2 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC12.68□□□□□ -0.38
Sh3rf2Q8BZT2 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Sh3rf2Q8BZT2 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Sh3rf2Q8BZT2 Gm28450-201ENSMUST00000187349 638 ntBASIC12.68□□□□□ -0.38
Sh3rf2Q8BZT2 Ighv5-7-201ENSMUST00000192302 244 ntBASIC12.68□□□□□ -0.38
Sh3rf2Q8BZT2 Gm45433-201ENSMUST00000209386 247 ntBASIC12.68□□□□□ -0.38
Sh3rf2Q8BZT2 Aprt-ps-201ENSMUST00000212311 505 ntBASIC12.68□□□□□ -0.38
Sh3rf2Q8BZT2 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.68□□□□□ -0.38
Sh3rf2Q8BZT2 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.68□□□□□ -0.38
Sh3rf2Q8BZT2 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sh3rf2Q8BZT2 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sh3rf2Q8BZT2 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sh3rf2Q8BZT2 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sh3rf2Q8BZT2 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sh3rf2Q8BZT2 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sh3rf2Q8BZT2 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sh3rf2Q8BZT2 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sh3rf2Q8BZT2 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sh3rf2Q8BZT2 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sh3rf2Q8BZT2 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sh3rf2Q8BZT2 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sh3rf2Q8BZT2 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sh3rf2Q8BZT2 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Sh3rf2Q8BZT2 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sh3rf2Q8BZT2 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sh3rf2Q8BZT2 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.68□□□□□ -0.38
Sh3rf2Q8BZT2 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sh3rf2Q8BZT2 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh3rf2Q8BZT2 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.67□□□□□ -0.38
Sh3rf2Q8BZT2 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh3rf2Q8BZT2 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh3rf2Q8BZT2 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sh3rf2Q8BZT2 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh3rf2Q8BZT2 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh3rf2Q8BZT2 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh3rf2Q8BZT2 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh3rf2Q8BZT2 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.67□□□□□ -0.38
Sh3rf2Q8BZT2 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Sh3rf2Q8BZT2 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh3rf2Q8BZT2 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Sh3rf2Q8BZT2 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.67□□□□□ -0.38
Sh3rf2Q8BZT2 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.67□□□□□ -0.38
Sh3rf2Q8BZT2 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh3rf2Q8BZT2 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 346.8 ms