Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Usp47Q8BY87 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Usp47Q8BY87 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Usp47Q8BY87 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Usp47Q8BY87 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC17.58■□□□□ 0.4
Usp47Q8BY87 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Usp47Q8BY87 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Usp47Q8BY87 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Usp47Q8BY87 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Usp47Q8BY87 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC17.58■□□□□ 0.4
Usp47Q8BY87 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Usp47Q8BY87 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC17.58■□□□□ 0.4
Usp47Q8BY87 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Usp47Q8BY87 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp47Q8BY87 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp47Q8BY87 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp47Q8BY87 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp47Q8BY87 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp47Q8BY87 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Usp47Q8BY87 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC17.57■□□□□ 0.4
Usp47Q8BY87 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC17.57■□□□□ 0.4
Usp47Q8BY87 Gm18212-201ENSMUST00000211678 889 ntBASIC17.57■□□□□ 0.4
Usp47Q8BY87 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC17.57■□□□□ 0.4
Usp47Q8BY87 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC17.57■□□□□ 0.4
Usp47Q8BY87 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp47Q8BY87 Gm8385-201ENSMUST00000058999 643 ntBASIC17.57■□□□□ 0.4
Usp47Q8BY87 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Usp47Q8BY87 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp47Q8BY87 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp47Q8BY87 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
Usp47Q8BY87 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp47Q8BY87 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Usp47Q8BY87 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC17.57■□□□□ 0.4
Usp47Q8BY87 AC160405.1-201ENSMUST00000218207 1545 ntBASIC17.57■□□□□ 0.4
Usp47Q8BY87 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp47Q8BY87 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp47Q8BY87 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp47Q8BY87 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Usp47Q8BY87 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Usp47Q8BY87 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC17.57■□□□□ 0.4
Usp47Q8BY87 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp47Q8BY87 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp47Q8BY87 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Usp47Q8BY87 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Usp47Q8BY87 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp47Q8BY87 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp47Q8BY87 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC17.56■□□□□ 0.4
Usp47Q8BY87 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Usp47Q8BY87 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Usp47Q8BY87 Gm43962-201ENSMUST00000203898 190 ntBASIC17.56■□□□□ 0.4
Usp47Q8BY87 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Usp47Q8BY87 Gm5363-201ENSMUST00000211927 938 ntBASIC17.56■□□□□ 0.4
Usp47Q8BY87 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC17.56■□□□□ 0.4
Usp47Q8BY87 Aprt-ps-201ENSMUST00000212311 505 ntBASIC17.56■□□□□ 0.4
Usp47Q8BY87 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp47Q8BY87 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp47Q8BY87 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Usp47Q8BY87 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp47Q8BY87 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp47Q8BY87 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Usp47Q8BY87 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp47Q8BY87 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
Usp47Q8BY87 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC17.56■□□□□ 0.4
Usp47Q8BY87 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp47Q8BY87 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp47Q8BY87 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp47Q8BY87 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp47Q8BY87 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Usp47Q8BY87 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp47Q8BY87 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp47Q8BY87 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Usp47Q8BY87 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Usp47Q8BY87 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
Usp47Q8BY87 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp47Q8BY87 Gm7857-201ENSMUST00000117957 358 ntBASIC17.55■□□□□ 0.4
Usp47Q8BY87 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Usp47Q8BY87 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Usp47Q8BY87 Gm16505-201ENSMUST00000179981 232 ntBASIC17.55■□□□□ 0.4
Usp47Q8BY87 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Usp47Q8BY87 Gm45433-201ENSMUST00000209386 247 ntBASIC17.55■□□□□ 0.4
Usp47Q8BY87 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC17.55■□□□□ 0.4
Usp47Q8BY87 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC17.55■□□□□ 0.4
Usp47Q8BY87 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp47Q8BY87 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp47Q8BY87 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp47Q8BY87 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Usp47Q8BY87 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp47Q8BY87 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Usp47Q8BY87 Gm44292-201ENSMUST00000205194 2364 ntBASIC17.55■□□□□ 0.4
Usp47Q8BY87 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Usp47Q8BY87 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp47Q8BY87 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp47Q8BY87 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp47Q8BY87 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Usp47Q8BY87 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Usp47Q8BY87 Gm37391-201ENSMUST00000194891 2318 ntBASIC17.55■□□□□ 0.4
Usp47Q8BY87 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC17.55■□□□□ 0.4
Usp47Q8BY87 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Usp47Q8BY87 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp47Q8BY87 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms