Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trerf1Q8BXJ2 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trerf1Q8BXJ2 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC13.28□□□□□ -0.28
Trerf1Q8BXJ2 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trerf1Q8BXJ2 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC13.28□□□□□ -0.28
Trerf1Q8BXJ2 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trerf1Q8BXJ2 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trerf1Q8BXJ2 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trerf1Q8BXJ2 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trerf1Q8BXJ2 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trerf1Q8BXJ2 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trerf1Q8BXJ2 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trerf1Q8BXJ2 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trerf1Q8BXJ2 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
Trerf1Q8BXJ2 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC13.28□□□□□ -0.28
Trerf1Q8BXJ2 Gm28693-202ENSMUST00000190758 331 ntBASIC13.28□□□□□ -0.28
Trerf1Q8BXJ2 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC13.28□□□□□ -0.28
Trerf1Q8BXJ2 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trerf1Q8BXJ2 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.28□□□□□ -0.28
Trerf1Q8BXJ2 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Trerf1Q8BXJ2 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trerf1Q8BXJ2 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trerf1Q8BXJ2 Gm9200-201ENSMUST00000118513 1354 ntBASIC13.28□□□□□ -0.28
Trerf1Q8BXJ2 Gm38049-201ENSMUST00000195698 1372 ntBASIC13.28□□□□□ -0.28
Trerf1Q8BXJ2 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC13.28□□□□□ -0.28
Trerf1Q8BXJ2 AC137842.1-201ENSMUST00000227896 2064 ntBASIC13.28□□□□□ -0.28
Trerf1Q8BXJ2 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trerf1Q8BXJ2 Gm19817-201ENSMUST00000199764 2132 ntBASIC13.28□□□□□ -0.28
Trerf1Q8BXJ2 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trerf1Q8BXJ2 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trerf1Q8BXJ2 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC13.28□□□□□ -0.28
Trerf1Q8BXJ2 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Trerf1Q8BXJ2 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trerf1Q8BXJ2 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trerf1Q8BXJ2 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trerf1Q8BXJ2 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trerf1Q8BXJ2 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trerf1Q8BXJ2 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Trerf1Q8BXJ2 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trerf1Q8BXJ2 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.28
Trerf1Q8BXJ2 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Trerf1Q8BXJ2 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Trerf1Q8BXJ2 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trerf1Q8BXJ2 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trerf1Q8BXJ2 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trerf1Q8BXJ2 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Trerf1Q8BXJ2 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trerf1Q8BXJ2 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trerf1Q8BXJ2 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trerf1Q8BXJ2 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trerf1Q8BXJ2 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trerf1Q8BXJ2 Gm12742-201ENSMUST00000117326 410 ntBASIC13.27□□□□□ -0.29
Trerf1Q8BXJ2 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trerf1Q8BXJ2 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trerf1Q8BXJ2 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC13.27□□□□□ -0.29
Trerf1Q8BXJ2 Gm38297-201ENSMUST00000195122 1057 ntBASIC13.27□□□□□ -0.29
Trerf1Q8BXJ2 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC13.27□□□□□ -0.29
Trerf1Q8BXJ2 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trerf1Q8BXJ2 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trerf1Q8BXJ2 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trerf1Q8BXJ2 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trerf1Q8BXJ2 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trerf1Q8BXJ2 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trerf1Q8BXJ2 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trerf1Q8BXJ2 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trerf1Q8BXJ2 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trerf1Q8BXJ2 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trerf1Q8BXJ2 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trerf1Q8BXJ2 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trerf1Q8BXJ2 AC211878.3-201ENSMUST00000222629 2018 ntBASIC13.27□□□□□ -0.29
Trerf1Q8BXJ2 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trerf1Q8BXJ2 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trerf1Q8BXJ2 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trerf1Q8BXJ2 Gm5939-201ENSMUST00000119613 2874 ntBASIC13.26□□□□□ -0.29
Trerf1Q8BXJ2 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trerf1Q8BXJ2 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trerf1Q8BXJ2 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
Trerf1Q8BXJ2 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trerf1Q8BXJ2 Gm12957-201ENSMUST00000117835 377 ntBASIC13.26□□□□□ -0.29
Trerf1Q8BXJ2 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trerf1Q8BXJ2 Gm6211-201ENSMUST00000147973 4275 ntBASIC13.26□□□□□ -0.29
Trerf1Q8BXJ2 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC13.26□□□□□ -0.29
Trerf1Q8BXJ2 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trerf1Q8BXJ2 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trerf1Q8BXJ2 Gm37542-201ENSMUST00000192563 2832 ntBASIC13.26□□□□□ -0.29
Trerf1Q8BXJ2 Gm9728-201ENSMUST00000200197 1055 ntBASIC13.26□□□□□ -0.29
Trerf1Q8BXJ2 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trerf1Q8BXJ2 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC13.26□□□□□ -0.29
Trerf1Q8BXJ2 AC126253.1-201ENSMUST00000227974 824 ntBASIC13.26□□□□□ -0.29
Trerf1Q8BXJ2 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trerf1Q8BXJ2 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trerf1Q8BXJ2 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trerf1Q8BXJ2 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trerf1Q8BXJ2 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trerf1Q8BXJ2 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trerf1Q8BXJ2 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trerf1Q8BXJ2 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trerf1Q8BXJ2 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Trerf1Q8BXJ2 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trerf1Q8BXJ2 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 331.3 ms