Protein–RNA interactions for Protein: Q8BWU1

Sprn, Shadow of prion protein, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SprnQ8BWU1 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
SprnQ8BWU1 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
SprnQ8BWU1 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SprnQ8BWU1 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
SprnQ8BWU1 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
SprnQ8BWU1 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
SprnQ8BWU1 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SprnQ8BWU1 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SprnQ8BWU1 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
SprnQ8BWU1 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
SprnQ8BWU1 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SprnQ8BWU1 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
SprnQ8BWU1 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SprnQ8BWU1 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
SprnQ8BWU1 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SprnQ8BWU1 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SprnQ8BWU1 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
SprnQ8BWU1 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SprnQ8BWU1 Gm7537-201ENSMUST00000221660 1414 ntBASIC11.04□□□□□ -0.64
SprnQ8BWU1 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
SprnQ8BWU1 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
SprnQ8BWU1 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
SprnQ8BWU1 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
SprnQ8BWU1 Gm11425-201ENSMUST00000119608 498 ntBASIC11.04□□□□□ -0.64
SprnQ8BWU1 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SprnQ8BWU1 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC11.04□□□□□ -0.64
SprnQ8BWU1 Gm36987-201ENSMUST00000194704 2979 ntBASIC11.04□□□□□ -0.64
SprnQ8BWU1 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC11.04□□□□□ -0.64
SprnQ8BWU1 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC11.04□□□□□ -0.64
SprnQ8BWU1 Gm18062-201ENSMUST00000208020 547 ntBASIC11.04□□□□□ -0.64
SprnQ8BWU1 Gm18055-201ENSMUST00000208254 547 ntBASIC11.04□□□□□ -0.64
SprnQ8BWU1 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
SprnQ8BWU1 Itm2b-204ENSMUST00000228637 783 ntBASIC11.04□□□□□ -0.64
SprnQ8BWU1 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
SprnQ8BWU1 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SprnQ8BWU1 Gm9396-201ENSMUST00000076703 567 ntBASIC11.04□□□□□ -0.64
SprnQ8BWU1 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
SprnQ8BWU1 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
SprnQ8BWU1 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
SprnQ8BWU1 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SprnQ8BWU1 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
SprnQ8BWU1 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
SprnQ8BWU1 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SprnQ8BWU1 Gm38157-201ENSMUST00000194178 1698 ntBASIC11.04□□□□□ -0.64
SprnQ8BWU1 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC11.04□□□□□ -0.64
SprnQ8BWU1 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SprnQ8BWU1 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SprnQ8BWU1 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SprnQ8BWU1 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
SprnQ8BWU1 Gm15544-201ENSMUST00000118776 1531 ntBASIC11.04□□□□□ -0.64
SprnQ8BWU1 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC11.04□□□□□ -0.64
SprnQ8BWU1 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SprnQ8BWU1 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SprnQ8BWU1 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SprnQ8BWU1 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
SprnQ8BWU1 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SprnQ8BWU1 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SprnQ8BWU1 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SprnQ8BWU1 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SprnQ8BWU1 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SprnQ8BWU1 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC11.03□□□□□ -0.64
SprnQ8BWU1 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SprnQ8BWU1 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SprnQ8BWU1 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
SprnQ8BWU1 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SprnQ8BWU1 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SprnQ8BWU1 Gm14704-201ENSMUST00000120300 874 ntBASIC11.03□□□□□ -0.64
SprnQ8BWU1 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
SprnQ8BWU1 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
SprnQ8BWU1 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SprnQ8BWU1 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SprnQ8BWU1 Gm6244-201ENSMUST00000178732 841 ntBASIC11.03□□□□□ -0.64
SprnQ8BWU1 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC11.03□□□□□ -0.64
SprnQ8BWU1 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC11.03□□□□□ -0.64
SprnQ8BWU1 Gm43416-201ENSMUST00000201916 1015 ntBASIC11.03□□□□□ -0.64
SprnQ8BWU1 Gm7067-201ENSMUST00000207698 1249 ntBASIC11.03□□□□□ -0.64
SprnQ8BWU1 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SprnQ8BWU1 Gm5356-201ENSMUST00000093326 615 ntBASIC11.03□□□□□ -0.64
SprnQ8BWU1 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SprnQ8BWU1 Gm45053-201ENSMUST00000206112 2499 ntBASIC11.03□□□□□ -0.64
SprnQ8BWU1 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SprnQ8BWU1 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SprnQ8BWU1 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
SprnQ8BWU1 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SprnQ8BWU1 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SprnQ8BWU1 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC11.03□□□□□ -0.64
SprnQ8BWU1 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC11.03□□□□□ -0.64
SprnQ8BWU1 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
SprnQ8BWU1 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SprnQ8BWU1 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SprnQ8BWU1 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
SprnQ8BWU1 AL645783.1-201ENSMUST00000221416 1832 ntBASIC11.02□□□□□ -0.64
SprnQ8BWU1 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
SprnQ8BWU1 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.64
SprnQ8BWU1 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
SprnQ8BWU1 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
SprnQ8BWU1 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
SprnQ8BWU1 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
SprnQ8BWU1 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC11.02□□□□□ -0.64
SprnQ8BWU1 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms