Protein–RNA interactions for Protein: Q8BJL0

Smarcal1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcal1Q8BJL0 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smarcal1Q8BJL0 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcal1Q8BJL0 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcal1Q8BJL0 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcal1Q8BJL0 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcal1Q8BJL0 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.34□□□□□ -0.27
Smarcal1Q8BJL0 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcal1Q8BJL0 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcal1Q8BJL0 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcal1Q8BJL0 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcal1Q8BJL0 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC13.34□□□□□ -0.27
Smarcal1Q8BJL0 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcal1Q8BJL0 Retreg1-206ENSMUST00000228306 1430 ntBASIC13.34□□□□□ -0.27
Smarcal1Q8BJL0 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcal1Q8BJL0 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Smarcal1Q8BJL0 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC13.34□□□□□ -0.27
Smarcal1Q8BJL0 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
Smarcal1Q8BJL0 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC13.34□□□□□ -0.27
Smarcal1Q8BJL0 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC13.34□□□□□ -0.27
Smarcal1Q8BJL0 Gm18038-201ENSMUST00000197900 485 ntBASIC13.34□□□□□ -0.27
Smarcal1Q8BJL0 Gm44136-201ENSMUST00000203819 1106 ntBASIC13.34□□□□□ -0.27
Smarcal1Q8BJL0 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC13.34□□□□□ -0.27
Smarcal1Q8BJL0 Gm18556-201ENSMUST00000219748 1031 ntBASIC13.34□□□□□ -0.27
Smarcal1Q8BJL0 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC13.34□□□□□ -0.27
Smarcal1Q8BJL0 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC13.34□□□□□ -0.27
Smarcal1Q8BJL0 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcal1Q8BJL0 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcal1Q8BJL0 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcal1Q8BJL0 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcal1Q8BJL0 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcal1Q8BJL0 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcal1Q8BJL0 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcal1Q8BJL0 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC13.34□□□□□ -0.27
Smarcal1Q8BJL0 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcal1Q8BJL0 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcal1Q8BJL0 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcal1Q8BJL0 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcal1Q8BJL0 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcal1Q8BJL0 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcal1Q8BJL0 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcal1Q8BJL0 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Smarcal1Q8BJL0 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcal1Q8BJL0 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcal1Q8BJL0 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcal1Q8BJL0 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcal1Q8BJL0 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcal1Q8BJL0 Ntrk2-204ENSMUST00000224259 3049 ntBASIC13.34□□□□□ -0.27
Smarcal1Q8BJL0 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcal1Q8BJL0 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcal1Q8BJL0 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcal1Q8BJL0 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Smarcal1Q8BJL0 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Smarcal1Q8BJL0 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Smarcal1Q8BJL0 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC13.33□□□□□ -0.27
Smarcal1Q8BJL0 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Smarcal1Q8BJL0 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcal1Q8BJL0 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcal1Q8BJL0 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Smarcal1Q8BJL0 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcal1Q8BJL0 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.33□□□□□ -0.28
Smarcal1Q8BJL0 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC13.33□□□□□ -0.28
Smarcal1Q8BJL0 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcal1Q8BJL0 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcal1Q8BJL0 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcal1Q8BJL0 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Smarcal1Q8BJL0 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC13.33□□□□□ -0.28
Smarcal1Q8BJL0 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC13.33□□□□□ -0.28
Smarcal1Q8BJL0 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC13.33□□□□□ -0.28
Smarcal1Q8BJL0 Gm5638-201ENSMUST00000118618 1258 ntBASIC13.33□□□□□ -0.28
Smarcal1Q8BJL0 Gm11450-201ENSMUST00000121144 333 ntBASIC13.33□□□□□ -0.28
Smarcal1Q8BJL0 Gm13394-201ENSMUST00000121658 1000 ntBASIC13.33□□□□□ -0.28
Smarcal1Q8BJL0 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcal1Q8BJL0 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcal1Q8BJL0 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcal1Q8BJL0 Gm37835-201ENSMUST00000193305 361 ntBASIC13.33□□□□□ -0.28
Smarcal1Q8BJL0 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC13.33□□□□□ -0.28
Smarcal1Q8BJL0 Gm44958-201ENSMUST00000203734 736 ntBASIC13.33□□□□□ -0.28
Smarcal1Q8BJL0 Gm7207-201ENSMUST00000211575 1067 ntBASIC13.33□□□□□ -0.28
Smarcal1Q8BJL0 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcal1Q8BJL0 Gm14267-206ENSMUST00000226870 1209 ntBASIC13.33□□□□□ -0.28
Smarcal1Q8BJL0 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcal1Q8BJL0 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC13.33□□□□□ -0.28
Smarcal1Q8BJL0 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcal1Q8BJL0 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcal1Q8BJL0 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Smarcal1Q8BJL0 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
Smarcal1Q8BJL0 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcal1Q8BJL0 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcal1Q8BJL0 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcal1Q8BJL0 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcal1Q8BJL0 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcal1Q8BJL0 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcal1Q8BJL0 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcal1Q8BJL0 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcal1Q8BJL0 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcal1Q8BJL0 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcal1Q8BJL0 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcal1Q8BJL0 Gm18626-201ENSMUST00000221512 1409 ntBASIC13.32□□□□□ -0.28
Smarcal1Q8BJL0 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcal1Q8BJL0 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms