Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SynbQ8BI41 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SynbQ8BI41 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SynbQ8BI41 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SynbQ8BI41 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC12□□□□□ -0.49
SynbQ8BI41 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
SynbQ8BI41 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
SynbQ8BI41 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12□□□□□ -0.49
SynbQ8BI41 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12□□□□□ -0.49
SynbQ8BI41 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SynbQ8BI41 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SynbQ8BI41 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC12□□□□□ -0.49
SynbQ8BI41 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
SynbQ8BI41 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
SynbQ8BI41 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SynbQ8BI41 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12□□□□□ -0.49
SynbQ8BI41 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC12□□□□□ -0.49
SynbQ8BI41 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC12□□□□□ -0.49
SynbQ8BI41 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC12□□□□□ -0.49
SynbQ8BI41 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC12□□□□□ -0.49
SynbQ8BI41 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12□□□□□ -0.49
SynbQ8BI41 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC12□□□□□ -0.49
SynbQ8BI41 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC12□□□□□ -0.49
SynbQ8BI41 Gm6458-201ENSMUST00000211573 635 ntBASIC12□□□□□ -0.49
SynbQ8BI41 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SynbQ8BI41 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12□□□□□ -0.49
SynbQ8BI41 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SynbQ8BI41 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12□□□□□ -0.49
SynbQ8BI41 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12□□□□□ -0.49
SynbQ8BI41 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
SynbQ8BI41 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
SynbQ8BI41 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SynbQ8BI41 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SynbQ8BI41 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SynbQ8BI41 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SynbQ8BI41 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12□□□□□ -0.49
SynbQ8BI41 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SynbQ8BI41 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SynbQ8BI41 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SynbQ8BI41 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SynbQ8BI41 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SynbQ8BI41 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SynbQ8BI41 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SynbQ8BI41 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
SynbQ8BI41 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SynbQ8BI41 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
SynbQ8BI41 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
SynbQ8BI41 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SynbQ8BI41 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SynbQ8BI41 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
SynbQ8BI41 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
SynbQ8BI41 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC11.99□□□□□ -0.49
SynbQ8BI41 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SynbQ8BI41 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC11.99□□□□□ -0.49
SynbQ8BI41 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SynbQ8BI41 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SynbQ8BI41 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SynbQ8BI41 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC11.99□□□□□ -0.49
SynbQ8BI41 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC11.99□□□□□ -0.49
SynbQ8BI41 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
SynbQ8BI41 Gm31256-201ENSMUST00000194705 506 ntBASIC11.99□□□□□ -0.49
SynbQ8BI41 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC11.99□□□□□ -0.49
SynbQ8BI41 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SynbQ8BI41 Gm13097-201ENSMUST00000210722 397 ntBASIC11.99□□□□□ -0.49
SynbQ8BI41 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC11.99□□□□□ -0.49
SynbQ8BI41 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SynbQ8BI41 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
SynbQ8BI41 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
SynbQ8BI41 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
SynbQ8BI41 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SynbQ8BI41 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
SynbQ8BI41 Gm10782-202ENSMUST00000223775 1480 ntBASIC11.99□□□□□ -0.49
SynbQ8BI41 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SynbQ8BI41 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC11.99□□□□□ -0.49
SynbQ8BI41 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
SynbQ8BI41 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
SynbQ8BI41 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
SynbQ8BI41 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SynbQ8BI41 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
SynbQ8BI41 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
SynbQ8BI41 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SynbQ8BI41 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
SynbQ8BI41 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SynbQ8BI41 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SynbQ8BI41 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SynbQ8BI41 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
SynbQ8BI41 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SynbQ8BI41 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
SynbQ8BI41 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
SynbQ8BI41 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
SynbQ8BI41 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
SynbQ8BI41 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SynbQ8BI41 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
SynbQ8BI41 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
SynbQ8BI41 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
SynbQ8BI41 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SynbQ8BI41 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SynbQ8BI41 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
SynbQ8BI41 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SynbQ8BI41 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms