Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Rnf38Q8BI21 Gm5356-201ENSMUST00000093326 615 ntBASIC12.11□□□□□ -0.47
Rnf38Q8BI21 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf38Q8BI21 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.11□□□□□ -0.47
Rnf38Q8BI21 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf38Q8BI21 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf38Q8BI21 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Rnf38Q8BI21 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf38Q8BI21 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf38Q8BI21 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.11□□□□□ -0.47
Rnf38Q8BI21 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf38Q8BI21 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf38Q8BI21 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Rnf38Q8BI21 Gm15163-201ENSMUST00000120749 1302 ntBASIC12.11□□□□□ -0.47
Rnf38Q8BI21 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.11□□□□□ -0.47
Rnf38Q8BI21 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf38Q8BI21 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Rnf38Q8BI21 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf38Q8BI21 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Rnf38Q8BI21 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf38Q8BI21 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12.1□□□□□ -0.47
Rnf38Q8BI21 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf38Q8BI21 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.1□□□□□ -0.47
Rnf38Q8BI21 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf38Q8BI21 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.1□□□□□ -0.47
Rnf38Q8BI21 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
Rnf38Q8BI21 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf38Q8BI21 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf38Q8BI21 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf38Q8BI21 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf38Q8BI21 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.1□□□□□ -0.47
Rnf38Q8BI21 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf38Q8BI21 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf38Q8BI21 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf38Q8BI21 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf38Q8BI21 Mir1894-201ENSMUST00000122802 81 ntBASIC12.1□□□□□ -0.47
Rnf38Q8BI21 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf38Q8BI21 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf38Q8BI21 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf38Q8BI21 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf38Q8BI21 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.1□□□□□ -0.47
Rnf38Q8BI21 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf38Q8BI21 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.1□□□□□ -0.47
Rnf38Q8BI21 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Rnf38Q8BI21 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf38Q8BI21 Gm6244-201ENSMUST00000178732 841 ntBASIC12.1□□□□□ -0.47
Rnf38Q8BI21 Gm27892-201ENSMUST00000185017 106 ntBASIC12.1□□□□□ -0.47
Rnf38Q8BI21 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.1□□□□□ -0.47
Rnf38Q8BI21 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.1□□□□□ -0.47
Rnf38Q8BI21 Gm17794-201ENSMUST00000220252 955 ntBASIC12.1□□□□□ -0.47
Rnf38Q8BI21 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf38Q8BI21 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.1□□□□□ -0.47
Rnf38Q8BI21 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf38Q8BI21 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf38Q8BI21 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.1□□□□□ -0.47
Rnf38Q8BI21 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf38Q8BI21 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf38Q8BI21 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf38Q8BI21 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf38Q8BI21 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf38Q8BI21 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf38Q8BI21 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf38Q8BI21 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf38Q8BI21 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Rnf38Q8BI21 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf38Q8BI21 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf38Q8BI21 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf38Q8BI21 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf38Q8BI21 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf38Q8BI21 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf38Q8BI21 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.09□□□□□ -0.47
Rnf38Q8BI21 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.09□□□□□ -0.47
Rnf38Q8BI21 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf38Q8BI21 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf38Q8BI21 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf38Q8BI21 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.47
Rnf38Q8BI21 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf38Q8BI21 E030026E10Rik-201ENSMUST00000200395 2217 ntBASIC12.09□□□□□ -0.47
Rnf38Q8BI21 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf38Q8BI21 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf38Q8BI21 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC12.09□□□□□ -0.47
Rnf38Q8BI21 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
Rnf38Q8BI21 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf38Q8BI21 AC110817.1-201ENSMUST00000225706 605 ntBASIC12.09□□□□□ -0.47
Rnf38Q8BI21 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf38Q8BI21 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf38Q8BI21 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf38Q8BI21 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf38Q8BI21 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.09□□□□□ -0.47
Rnf38Q8BI21 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.09□□□□□ -0.47
Rnf38Q8BI21 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf38Q8BI21 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf38Q8BI21 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf38Q8BI21 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
Rnf38Q8BI21 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf38Q8BI21 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf38Q8BI21 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.09□□□□□ -0.47
Rnf38Q8BI21 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf38Q8BI21 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Rnf38Q8BI21 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms