Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim6Q8BGE7 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC13.31□□□□□ -0.28
Trim6Q8BGE7 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim6Q8BGE7 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim6Q8BGE7 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim6Q8BGE7 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim6Q8BGE7 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim6Q8BGE7 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim6Q8BGE7 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Trim6Q8BGE7 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim6Q8BGE7 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim6Q8BGE7 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim6Q8BGE7 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC13.3□□□□□ -0.28
Trim6Q8BGE7 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim6Q8BGE7 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim6Q8BGE7 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim6Q8BGE7 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim6Q8BGE7 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim6Q8BGE7 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trim6Q8BGE7 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trim6Q8BGE7 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim6Q8BGE7 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC13.3□□□□□ -0.28
Trim6Q8BGE7 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim6Q8BGE7 Gm5276-201ENSMUST00000196683 1047 ntBASIC13.3□□□□□ -0.28
Trim6Q8BGE7 Gm42929-201ENSMUST00000198374 1286 ntBASIC13.3□□□□□ -0.28
Trim6Q8BGE7 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC13.3□□□□□ -0.28
Trim6Q8BGE7 AC169036.1-201ENSMUST00000227994 296 ntBASIC13.3□□□□□ -0.28
Trim6Q8BGE7 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim6Q8BGE7 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim6Q8BGE7 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim6Q8BGE7 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim6Q8BGE7 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim6Q8BGE7 Gm44831-201ENSMUST00000208469 2989 ntBASIC13.3□□□□□ -0.28
Trim6Q8BGE7 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim6Q8BGE7 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim6Q8BGE7 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC13.3□□□□□ -0.28
Trim6Q8BGE7 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Trim6Q8BGE7 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim6Q8BGE7 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim6Q8BGE7 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim6Q8BGE7 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim6Q8BGE7 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trim6Q8BGE7 AC154639.1-201ENSMUST00000224393 2849 ntBASIC13.3□□□□□ -0.28
Trim6Q8BGE7 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC13.3□□□□□ -0.28
Trim6Q8BGE7 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim6Q8BGE7 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC13.29□□□□□ -0.28
Trim6Q8BGE7 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim6Q8BGE7 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC13.29□□□□□ -0.28
Trim6Q8BGE7 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trim6Q8BGE7 Map1b-203ENSMUST00000223725 2669 ntBASIC13.29□□□□□ -0.28
Trim6Q8BGE7 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Trim6Q8BGE7 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim6Q8BGE7 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim6Q8BGE7 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim6Q8BGE7 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC13.29□□□□□ -0.28
Trim6Q8BGE7 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim6Q8BGE7 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim6Q8BGE7 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim6Q8BGE7 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim6Q8BGE7 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC13.29□□□□□ -0.28
Trim6Q8BGE7 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC13.29□□□□□ -0.28
Trim6Q8BGE7 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim6Q8BGE7 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trim6Q8BGE7 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim6Q8BGE7 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC13.29□□□□□ -0.28
Trim6Q8BGE7 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim6Q8BGE7 Gm27390-201ENSMUST00000184516 176 ntBASIC13.29□□□□□ -0.28
Trim6Q8BGE7 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC13.29□□□□□ -0.28
Trim6Q8BGE7 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC13.29□□□□□ -0.28
Trim6Q8BGE7 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC13.29□□□□□ -0.28
Trim6Q8BGE7 Gm37917-201ENSMUST00000194711 392 ntBASIC13.29□□□□□ -0.28
Trim6Q8BGE7 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim6Q8BGE7 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim6Q8BGE7 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim6Q8BGE7 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim6Q8BGE7 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Trim6Q8BGE7 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC13.29□□□□□ -0.28
Trim6Q8BGE7 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim6Q8BGE7 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC13.29□□□□□ -0.28
Trim6Q8BGE7 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC13.29□□□□□ -0.28
Trim6Q8BGE7 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim6Q8BGE7 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim6Q8BGE7 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim6Q8BGE7 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC13.29□□□□□ -0.28
Trim6Q8BGE7 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC13.29□□□□□ -0.28
Trim6Q8BGE7 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim6Q8BGE7 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim6Q8BGE7 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Trim6Q8BGE7 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC13.29□□□□□ -0.28
Trim6Q8BGE7 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim6Q8BGE7 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim6Q8BGE7 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim6Q8BGE7 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim6Q8BGE7 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim6Q8BGE7 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
Trim6Q8BGE7 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim6Q8BGE7 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim6Q8BGE7 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim6Q8BGE7 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Trim6Q8BGE7 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 76.4 ms