Protein–RNA interactions for Protein: Q810N9

Ccdc172, Coiled-coil domain-containing protein 172, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc172Q810N9 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc172Q810N9 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Ccdc172Q810N9 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc172Q810N9 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Ccdc172Q810N9 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc172Q810N9 Gm42853-201ENSMUST00000201273 1387 ntBASIC14.25□□□□□ -0.13
Ccdc172Q810N9 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc172Q810N9 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Ccdc172Q810N9 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc172Q810N9 Gm45266-201ENSMUST00000210111 2173 ntBASIC14.25□□□□□ -0.13
Ccdc172Q810N9 Gm24231-201ENSMUST00000104315 133 ntBASIC14.25□□□□□ -0.13
Ccdc172Q810N9 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC14.25□□□□□ -0.13
Ccdc172Q810N9 Gm13297-201ENSMUST00000120205 934 ntBASIC14.25□□□□□ -0.13
Ccdc172Q810N9 Gm13315-201ENSMUST00000120376 991 ntBASIC14.25□□□□□ -0.13
Ccdc172Q810N9 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC14.25□□□□□ -0.13
Ccdc172Q810N9 Gm11597-201ENSMUST00000121423 964 ntBASIC14.25□□□□□ -0.13
Ccdc172Q810N9 Gm14760-201ENSMUST00000121831 999 ntBASIC14.25□□□□□ -0.13
Ccdc172Q810N9 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc172Q810N9 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc172Q810N9 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc172Q810N9 Gm37489-201ENSMUST00000191883 159 ntBASIC14.25□□□□□ -0.13
Ccdc172Q810N9 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC14.25□□□□□ -0.13
Ccdc172Q810N9 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc172Q810N9 Gm8227-201ENSMUST00000223306 571 ntBASIC14.25□□□□□ -0.13
Ccdc172Q810N9 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc172Q810N9 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Ccdc172Q810N9 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc172Q810N9 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
Ccdc172Q810N9 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc172Q810N9 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Ccdc172Q810N9 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc172Q810N9 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc172Q810N9 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc172Q810N9 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Ccdc172Q810N9 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Ccdc172Q810N9 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc172Q810N9 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc172Q810N9 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc172Q810N9 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC14.25□□□□□ -0.13
Ccdc172Q810N9 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc172Q810N9 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc172Q810N9 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC14.25□□□□□ -0.13
Ccdc172Q810N9 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Ccdc172Q810N9 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc172Q810N9 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc172Q810N9 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC14.24□□□□□ -0.13
Ccdc172Q810N9 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc172Q810N9 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc172Q810N9 Gm37737-201ENSMUST00000195013 1638 ntBASIC14.24□□□□□ -0.13
Ccdc172Q810N9 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc172Q810N9 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc172Q810N9 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC14.24□□□□□ -0.13
Ccdc172Q810N9 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Ccdc172Q810N9 Gm4986-201ENSMUST00000119731 549 ntBASIC14.24□□□□□ -0.13
Ccdc172Q810N9 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc172Q810N9 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC14.24□□□□□ -0.13
Ccdc172Q810N9 Morn2-202ENSMUST00000227729 656 ntBASIC14.24□□□□□ -0.13
Ccdc172Q810N9 AC169036.1-201ENSMUST00000227994 296 ntBASIC14.24□□□□□ -0.13
Ccdc172Q810N9 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc172Q810N9 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc172Q810N9 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc172Q810N9 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc172Q810N9 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc172Q810N9 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Ccdc172Q810N9 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc172Q810N9 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc172Q810N9 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc172Q810N9 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc172Q810N9 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC14.23□□□□□ -0.13
Ccdc172Q810N9 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc172Q810N9 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC14.23□□□□□ -0.13
Ccdc172Q810N9 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc172Q810N9 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Ccdc172Q810N9 Gm4366-201ENSMUST00000201488 1342 ntBASIC14.23□□□□□ -0.13
Ccdc172Q810N9 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc172Q810N9 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc172Q810N9 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc172Q810N9 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC14.23□□□□□ -0.13
Ccdc172Q810N9 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc172Q810N9 Gm15370-201ENSMUST00000117158 253 ntBASIC14.23□□□□□ -0.13
Ccdc172Q810N9 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC14.23□□□□□ -0.13
Ccdc172Q810N9 Gm13342-201ENSMUST00000121055 207 ntBASIC14.23□□□□□ -0.13
Ccdc172Q810N9 Gm8908-201ENSMUST00000121633 1024 ntBASIC14.23□□□□□ -0.13
Ccdc172Q810N9 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC14.23□□□□□ -0.13
Ccdc172Q810N9 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC14.23□□□□□ -0.13
Ccdc172Q810N9 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Ccdc172Q810N9 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc172Q810N9 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC14.23□□□□□ -0.13
Ccdc172Q810N9 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC14.23□□□□□ -0.13
Ccdc172Q810N9 Gm9004-201ENSMUST00000218739 1222 ntBASIC14.23□□□□□ -0.13
Ccdc172Q810N9 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Ccdc172Q810N9 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Ccdc172Q810N9 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc172Q810N9 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc172Q810N9 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC14.23□□□□□ -0.13
Ccdc172Q810N9 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc172Q810N9 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc172Q810N9 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc172Q810N9 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc172Q810N9 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms