Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vrk1Q80X41 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vrk1Q80X41 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vrk1Q80X41 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vrk1Q80X41 Ssr1-203ENSMUST00000225246 1825 ntBASIC11.99□□□□□ -0.49
Vrk1Q80X41 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vrk1Q80X41 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vrk1Q80X41 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vrk1Q80X41 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vrk1Q80X41 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vrk1Q80X41 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Vrk1Q80X41 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC11.99□□□□□ -0.49
Vrk1Q80X41 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Vrk1Q80X41 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Vrk1Q80X41 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vrk1Q80X41 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vrk1Q80X41 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vrk1Q80X41 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vrk1Q80X41 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Vrk1Q80X41 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Vrk1Q80X41 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Vrk1Q80X41 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC11.98□□□□□ -0.49
Vrk1Q80X41 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vrk1Q80X41 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Vrk1Q80X41 Gm43823-201ENSMUST00000197391 1808 ntBASIC11.98□□□□□ -0.49
Vrk1Q80X41 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC11.98□□□□□ -0.49
Vrk1Q80X41 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vrk1Q80X41 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC11.98□□□□□ -0.49
Vrk1Q80X41 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vrk1Q80X41 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
Vrk1Q80X41 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vrk1Q80X41 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Vrk1Q80X41 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC11.98□□□□□ -0.49
Vrk1Q80X41 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Vrk1Q80X41 Rprl1-202ENSMUST00000198476 238 ntBASIC11.98□□□□□ -0.49
Vrk1Q80X41 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Vrk1Q80X41 Gm45691-201ENSMUST00000206905 1120 ntBASIC11.98□□□□□ -0.49
Vrk1Q80X41 Gzmn-202ENSMUST00000225535 989 ntBASIC11.98□□□□□ -0.49
Vrk1Q80X41 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vrk1Q80X41 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vrk1Q80X41 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vrk1Q80X41 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vrk1Q80X41 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vrk1Q80X41 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Vrk1Q80X41 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vrk1Q80X41 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vrk1Q80X41 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
Vrk1Q80X41 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC11.98□□□□□ -0.49
Vrk1Q80X41 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
Vrk1Q80X41 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vrk1Q80X41 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vrk1Q80X41 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC11.98□□□□□ -0.49
Vrk1Q80X41 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
Vrk1Q80X41 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vrk1Q80X41 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC11.97□□□□□ -0.49
Vrk1Q80X41 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vrk1Q80X41 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
Vrk1Q80X41 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Vrk1Q80X41 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
Vrk1Q80X41 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vrk1Q80X41 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vrk1Q80X41 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC11.97□□□□□ -0.49
Vrk1Q80X41 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vrk1Q80X41 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vrk1Q80X41 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vrk1Q80X41 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vrk1Q80X41 Gm12176-201ENSMUST00000121420 875 ntBASIC11.97□□□□□ -0.49
Vrk1Q80X41 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC11.97□□□□□ -0.49
Vrk1Q80X41 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Vrk1Q80X41 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC11.97□□□□□ -0.49
Vrk1Q80X41 Gm24845-201ENSMUST00000158034 109 ntBASIC11.97□□□□□ -0.49
Vrk1Q80X41 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC11.97□□□□□ -0.49
Vrk1Q80X41 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC11.97□□□□□ -0.49
Vrk1Q80X41 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
Vrk1Q80X41 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Vrk1Q80X41 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vrk1Q80X41 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC11.97□□□□□ -0.49
Vrk1Q80X41 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Vrk1Q80X41 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC11.97□□□□□ -0.49
Vrk1Q80X41 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Vrk1Q80X41 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC11.97□□□□□ -0.49
Vrk1Q80X41 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vrk1Q80X41 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vrk1Q80X41 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Vrk1Q80X41 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Vrk1Q80X41 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Vrk1Q80X41 Gm44094-201ENSMUST00000204703 2030 ntBASIC11.97□□□□□ -0.49
Vrk1Q80X41 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vrk1Q80X41 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC11.97□□□□□ -0.49
Vrk1Q80X41 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Vrk1Q80X41 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vrk1Q80X41 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vrk1Q80X41 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vrk1Q80X41 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vrk1Q80X41 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC11.97□□□□□ -0.49
Vrk1Q80X41 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vrk1Q80X41 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.97□□□□□ -0.49
Vrk1Q80X41 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Vrk1Q80X41 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vrk1Q80X41 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 76.5 ms