Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Prpf40bQ80W14 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC14.47□□□□□ -0.09
Prpf40bQ80W14 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Prpf40bQ80W14 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC14.47□□□□□ -0.09
Prpf40bQ80W14 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Prpf40bQ80W14 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Prpf40bQ80W14 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Prpf40bQ80W14 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Prpf40bQ80W14 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Prpf40bQ80W14 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Prpf40bQ80W14 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Prpf40bQ80W14 Gm13323-201ENSMUST00000120245 1151 ntBASIC14.47□□□□□ -0.09
Prpf40bQ80W14 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Prpf40bQ80W14 Gm18393-201ENSMUST00000208349 1131 ntBASIC14.47□□□□□ -0.09
Prpf40bQ80W14 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Prpf40bQ80W14 Spcs1-203ENSMUST00000226374 592 ntBASIC14.47□□□□□ -0.09
Prpf40bQ80W14 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Prpf40bQ80W14 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Prpf40bQ80W14 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Prpf40bQ80W14 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Prpf40bQ80W14 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Prpf40bQ80W14 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
Prpf40bQ80W14 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Prpf40bQ80W14 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Prpf40bQ80W14 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC14.47□□□□□ -0.09
Prpf40bQ80W14 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Prpf40bQ80W14 AC125108.1-201ENSMUST00000218986 2330 ntBASIC14.47□□□□□ -0.09
Prpf40bQ80W14 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Prpf40bQ80W14 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Prpf40bQ80W14 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Prpf40bQ80W14 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Prpf40bQ80W14 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Prpf40bQ80W14 Gm38157-201ENSMUST00000194178 1698 ntBASIC14.46□□□□□ -0.09
Prpf40bQ80W14 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC14.46□□□□□ -0.09
Prpf40bQ80W14 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Prpf40bQ80W14 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Prpf40bQ80W14 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Prpf40bQ80W14 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Prpf40bQ80W14 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC14.46□□□□□ -0.09
Prpf40bQ80W14 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC14.46□□□□□ -0.09
Prpf40bQ80W14 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
Prpf40bQ80W14 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Prpf40bQ80W14 Gm15131-201ENSMUST00000119124 595 ntBASIC14.46□□□□□ -0.09
Prpf40bQ80W14 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC14.46□□□□□ -0.09
Prpf40bQ80W14 Gm44651-201ENSMUST00000207343 372 ntBASIC14.46□□□□□ -0.09
Prpf40bQ80W14 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Prpf40bQ80W14 AC122876.1-201ENSMUST00000217619 825 ntBASIC14.46□□□□□ -0.09
Prpf40bQ80W14 Gm8712-201ENSMUST00000221090 701 ntBASIC14.46□□□□□ -0.09
Prpf40bQ80W14 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Prpf40bQ80W14 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Prpf40bQ80W14 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC14.46□□□□□ -0.09
Prpf40bQ80W14 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Prpf40bQ80W14 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Prpf40bQ80W14 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Prpf40bQ80W14 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Prpf40bQ80W14 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Prpf40bQ80W14 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Prpf40bQ80W14 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Prpf40bQ80W14 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Prpf40bQ80W14 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Prpf40bQ80W14 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Prpf40bQ80W14 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf40bQ80W14 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Prpf40bQ80W14 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
Prpf40bQ80W14 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf40bQ80W14 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Prpf40bQ80W14 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf40bQ80W14 Gm42863-201ENSMUST00000197875 2958 ntBASIC14.45□□□□□ -0.1
Prpf40bQ80W14 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Prpf40bQ80W14 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf40bQ80W14 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf40bQ80W14 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf40bQ80W14 Gm6161-201ENSMUST00000121942 1102 ntBASIC14.45□□□□□ -0.1
Prpf40bQ80W14 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Prpf40bQ80W14 Gm6254-201ENSMUST00000168178 1072 ntBASIC14.45□□□□□ -0.1
Prpf40bQ80W14 Gm6153-201ENSMUST00000172004 1058 ntBASIC14.45□□□□□ -0.1
Prpf40bQ80W14 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC14.45□□□□□ -0.1
Prpf40bQ80W14 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Prpf40bQ80W14 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
Prpf40bQ80W14 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf40bQ80W14 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC14.45□□□□□ -0.1
Prpf40bQ80W14 Gm5641-202ENSMUST00000198699 1080 ntBASIC14.45□□□□□ -0.1
Prpf40bQ80W14 Gm19931-201ENSMUST00000198920 368 ntBASIC14.45□□□□□ -0.1
Prpf40bQ80W14 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf40bQ80W14 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf40bQ80W14 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf40bQ80W14 AC113031.8-201ENSMUST00000227856 631 ntBASIC14.45□□□□□ -0.1
Prpf40bQ80W14 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf40bQ80W14 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Prpf40bQ80W14 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf40bQ80W14 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf40bQ80W14 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf40bQ80W14 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC14.45□□□□□ -0.1
Prpf40bQ80W14 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC14.45□□□□□ -0.1
Prpf40bQ80W14 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf40bQ80W14 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf40bQ80W14 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf40bQ80W14 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf40bQ80W14 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf40bQ80W14 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms