Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim62Q80V85 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim62Q80V85 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim62Q80V85 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.95□□□□□ -0.34
Trim62Q80V85 Gm15547-201ENSMUST00000122152 333 ntBASIC12.95□□□□□ -0.34
Trim62Q80V85 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC12.95□□□□□ -0.34
Trim62Q80V85 Gm23119-201ENSMUST00000158610 140 ntBASIC12.95□□□□□ -0.34
Trim62Q80V85 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trim62Q80V85 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim62Q80V85 Mir8109-201ENSMUST00000184375 117 ntBASIC12.95□□□□□ -0.34
Trim62Q80V85 Gm28882-201ENSMUST00000185504 314 ntBASIC12.95□□□□□ -0.34
Trim62Q80V85 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim62Q80V85 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim62Q80V85 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trim62Q80V85 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim62Q80V85 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trim62Q80V85 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Trim62Q80V85 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim62Q80V85 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim62Q80V85 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim62Q80V85 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Trim62Q80V85 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim62Q80V85 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.95□□□□□ -0.34
Trim62Q80V85 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Trim62Q80V85 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim62Q80V85 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.95□□□□□ -0.34
Trim62Q80V85 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim62Q80V85 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim62Q80V85 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trim62Q80V85 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim62Q80V85 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim62Q80V85 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim62Q80V85 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim62Q80V85 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.94□□□□□ -0.34
Trim62Q80V85 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim62Q80V85 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.94□□□□□ -0.34
Trim62Q80V85 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim62Q80V85 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim62Q80V85 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim62Q80V85 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC12.94□□□□□ -0.34
Trim62Q80V85 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim62Q80V85 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trim62Q80V85 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim62Q80V85 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim62Q80V85 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.94□□□□□ -0.34
Trim62Q80V85 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim62Q80V85 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
Trim62Q80V85 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trim62Q80V85 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC12.94□□□□□ -0.34
Trim62Q80V85 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim62Q80V85 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.94□□□□□ -0.34
Trim62Q80V85 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC12.94□□□□□ -0.34
Trim62Q80V85 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim62Q80V85 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim62Q80V85 Gm38341-201ENSMUST00000195357 515 ntBASIC12.94□□□□□ -0.34
Trim62Q80V85 Gm6334-201ENSMUST00000207083 228 ntBASIC12.94□□□□□ -0.34
Trim62Q80V85 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC12.94□□□□□ -0.34
Trim62Q80V85 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC12.94□□□□□ -0.34
Trim62Q80V85 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.94□□□□□ -0.34
Trim62Q80V85 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim62Q80V85 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Trim62Q80V85 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trim62Q80V85 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim62Q80V85 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Trim62Q80V85 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim62Q80V85 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim62Q80V85 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Trim62Q80V85 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim62Q80V85 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim62Q80V85 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim62Q80V85 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim62Q80V85 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim62Q80V85 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim62Q80V85 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim62Q80V85 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim62Q80V85 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim62Q80V85 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim62Q80V85 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim62Q80V85 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim62Q80V85 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim62Q80V85 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim62Q80V85 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim62Q80V85 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim62Q80V85 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim62Q80V85 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim62Q80V85 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim62Q80V85 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim62Q80V85 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
Trim62Q80V85 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Trim62Q80V85 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Trim62Q80V85 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.93□□□□□ -0.34
Trim62Q80V85 Gm25214-201ENSMUST00000104573 129 ntBASIC12.93□□□□□ -0.34
Trim62Q80V85 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Trim62Q80V85 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trim62Q80V85 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.93□□□□□ -0.34
Trim62Q80V85 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim62Q80V85 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim62Q80V85 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC12.93□□□□□ -0.34
Trim62Q80V85 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim62Q80V85 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 108.8 ms