Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Usp8Q80U87 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Usp8Q80U87 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Usp8Q80U87 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Usp8Q80U87 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Usp8Q80U87 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Usp8Q80U87 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Usp8Q80U87 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Usp8Q80U87 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.59□□□□□ -0.39
Usp8Q80U87 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.58□□□□□ -0.39
Usp8Q80U87 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.58□□□□□ -0.39
Usp8Q80U87 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.39
Usp8Q80U87 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.58□□□□□ -0.39
Usp8Q80U87 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Usp8Q80U87 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Usp8Q80U87 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Usp8Q80U87 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Usp8Q80U87 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Usp8Q80U87 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Usp8Q80U87 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Usp8Q80U87 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Usp8Q80U87 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Usp8Q80U87 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Usp8Q80U87 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.58□□□□□ -0.4
Usp8Q80U87 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.58□□□□□ -0.4
Usp8Q80U87 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.58□□□□□ -0.4
Usp8Q80U87 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Usp8Q80U87 Gm13813-201ENSMUST00000120998 787 ntBASIC12.58□□□□□ -0.4
Usp8Q80U87 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Usp8Q80U87 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.58□□□□□ -0.4
Usp8Q80U87 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Usp8Q80U87 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.58□□□□□ -0.4
Usp8Q80U87 Gm9002-201ENSMUST00000178437 499 ntBASIC12.58□□□□□ -0.4
Usp8Q80U87 Gm6244-201ENSMUST00000178732 841 ntBASIC12.58□□□□□ -0.4
Usp8Q80U87 H2-Pa-201ENSMUST00000182803 626 ntBASIC12.58□□□□□ -0.4
Usp8Q80U87 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Usp8Q80U87 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Usp8Q80U87 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Usp8Q80U87 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Usp8Q80U87 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Usp8Q80U87 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Usp8Q80U87 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Usp8Q80U87 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Usp8Q80U87 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.58□□□□□ -0.4
Usp8Q80U87 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Usp8Q80U87 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Usp8Q80U87 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.58□□□□□ -0.4
Usp8Q80U87 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Usp8Q80U87 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Usp8Q80U87 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Usp8Q80U87 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Usp8Q80U87 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Usp8Q80U87 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp8Q80U87 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp8Q80U87 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Usp8Q80U87 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp8Q80U87 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.57□□□□□ -0.4
Usp8Q80U87 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp8Q80U87 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Usp8Q80U87 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Usp8Q80U87 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp8Q80U87 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp8Q80U87 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp8Q80U87 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp8Q80U87 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp8Q80U87 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp8Q80U87 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp8Q80U87 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp8Q80U87 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.57□□□□□ -0.4
Usp8Q80U87 Gm12138-201ENSMUST00000122180 951 ntBASIC12.57□□□□□ -0.4
Usp8Q80U87 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp8Q80U87 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp8Q80U87 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.57□□□□□ -0.4
Usp8Q80U87 Gm8810-201ENSMUST00000172895 754 ntBASIC12.57□□□□□ -0.4
Usp8Q80U87 Gm24196-201ENSMUST00000179161 110 ntBASIC12.57□□□□□ -0.4
Usp8Q80U87 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.57□□□□□ -0.4
Usp8Q80U87 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.57□□□□□ -0.4
Usp8Q80U87 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp8Q80U87 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Usp8Q80U87 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Usp8Q80U87 Gm10012-201ENSMUST00000078252 192 ntBASIC12.57□□□□□ -0.4
Usp8Q80U87 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp8Q80U87 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp8Q80U87 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp8Q80U87 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp8Q80U87 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp8Q80U87 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp8Q80U87 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Usp8Q80U87 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp8Q80U87 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp8Q80U87 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Usp8Q80U87 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp8Q80U87 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp8Q80U87 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Usp8Q80U87 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp8Q80U87 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp8Q80U87 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp8Q80U87 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp8Q80U87 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp8Q80U87 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 81.9 ms