Protein–RNA interactions for Protein: Q80TP3

Ubr5, E3 ubiquitin-protein ligase UBR5, mousemouse

Predictions only

Length 2,792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr5Q80TP3 Gm10169-201ENSMUST00000121822 348 ntBASIC10.54□□□□□ -0.72
Ubr5Q80TP3 Zfp961-203ENSMUST00000132848 781 ntTSL 5 BASIC10.54□□□□□ -0.72
Ubr5Q80TP3 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Ubr5Q80TP3 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ubr5Q80TP3 Gm37795-201ENSMUST00000194216 2459 ntBASIC10.54□□□□□ -0.72
Ubr5Q80TP3 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Ubr5Q80TP3 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Ubr5Q80TP3 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ubr5Q80TP3 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ubr5Q80TP3 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Ubr5Q80TP3 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Ubr5Q80TP3 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ubr5Q80TP3 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ubr5Q80TP3 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ubr5Q80TP3 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Ubr5Q80TP3 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC10.54□□□□□ -0.72
Ubr5Q80TP3 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ubr5Q80TP3 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC10.54□□□□□ -0.72
Ubr5Q80TP3 Gm16240-201ENSMUST00000161924 614 ntTSL 2 BASIC10.54□□□□□ -0.72
Ubr5Q80TP3 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC10.54□□□□□ -0.72
Ubr5Q80TP3 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC10.54□□□□□ -0.72
Ubr5Q80TP3 Gm37197-201ENSMUST00000195607 401 ntBASIC10.54□□□□□ -0.72
Ubr5Q80TP3 Gm35960-201ENSMUST00000202712 767 ntBASIC10.54□□□□□ -0.72
Ubr5Q80TP3 AC113082.1-201ENSMUST00000217324 327 ntBASIC10.54□□□□□ -0.72
Ubr5Q80TP3 Gm18499-201ENSMUST00000220808 1021 ntBASIC10.54□□□□□ -0.72
Ubr5Q80TP3 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ubr5Q80TP3 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ubr5Q80TP3 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Ubr5Q80TP3 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Ubr5Q80TP3 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC10.54□□□□□ -0.72
Ubr5Q80TP3 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ubr5Q80TP3 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Ubr5Q80TP3 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Ubr5Q80TP3 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Ubr5Q80TP3 AC164107.1-201ENSMUST00000227730 2161 ntBASIC10.53□□□□□ -0.72
Ubr5Q80TP3 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ubr5Q80TP3 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ubr5Q80TP3 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ubr5Q80TP3 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ubr5Q80TP3 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Ubr5Q80TP3 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Ubr5Q80TP3 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Ubr5Q80TP3 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Ubr5Q80TP3 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ubr5Q80TP3 Gm15615-201ENSMUST00000118876 198 ntBASIC10.53□□□□□ -0.72
Ubr5Q80TP3 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC10.53□□□□□ -0.72
Ubr5Q80TP3 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Ubr5Q80TP3 Gm3150-201ENSMUST00000166418 204 ntBASIC10.53□□□□□ -0.72
Ubr5Q80TP3 Mir6973a-201ENSMUST00000183646 78 ntBASIC10.53□□□□□ -0.72
Ubr5Q80TP3 Gm38117-201ENSMUST00000194653 939 ntBASIC10.53□□□□□ -0.72
Ubr5Q80TP3 Gm45113-201ENSMUST00000207518 165 ntBASIC10.53□□□□□ -0.72
Ubr5Q80TP3 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Ubr5Q80TP3 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ubr5Q80TP3 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ubr5Q80TP3 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ubr5Q80TP3 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ubr5Q80TP3 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ubr5Q80TP3 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC10.53□□□□□ -0.72
Ubr5Q80TP3 Gm36970-201ENSMUST00000193688 1859 ntBASIC10.53□□□□□ -0.72
Ubr5Q80TP3 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ubr5Q80TP3 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ubr5Q80TP3 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ubr5Q80TP3 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Ubr5Q80TP3 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC10.53□□□□□ -0.72
Ubr5Q80TP3 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ubr5Q80TP3 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC10.53□□□□□ -0.72
Ubr5Q80TP3 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ubr5Q80TP3 Trav10d-201ENSMUST00000103646 406 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Ubr5Q80TP3 Gm11619-201ENSMUST00000117474 237 ntBASIC10.53□□□□□ -0.72
Ubr5Q80TP3 Gm12274-201ENSMUST00000120062 385 ntBASIC10.53□□□□□ -0.72
Ubr5Q80TP3 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Ubr5Q80TP3 Gm43854-201ENSMUST00000200418 394 ntBASIC10.53□□□□□ -0.72
Ubr5Q80TP3 Gm43506-201ENSMUST00000200675 753 ntBASIC10.53□□□□□ -0.72
Ubr5Q80TP3 Gm44315-201ENSMUST00000203041 219 ntBASIC10.53□□□□□ -0.72
Ubr5Q80TP3 Gm8574-201ENSMUST00000203207 924 ntBASIC10.53□□□□□ -0.72
Ubr5Q80TP3 Gm43969-201ENSMUST00000204833 535 ntBASIC10.53□□□□□ -0.72
Ubr5Q80TP3 Gm40910-202ENSMUST00000223077 569 ntTSL 5 BASIC10.53□□□□□ -0.72
Ubr5Q80TP3 AC121960.1-201ENSMUST00000227982 564 ntBASIC10.53□□□□□ -0.72
Ubr5Q80TP3 AC142266.1-201ENSMUST00000228107 415 ntBASIC10.53□□□□□ -0.72
Ubr5Q80TP3 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ubr5Q80TP3 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ubr5Q80TP3 Matn2-206ENSMUST00000228570 2798 ntBASIC10.53□□□□□ -0.72
Ubr5Q80TP3 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Ubr5Q80TP3 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ubr5Q80TP3 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ubr5Q80TP3 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Ubr5Q80TP3 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.72
Ubr5Q80TP3 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.72
Ubr5Q80TP3 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.72
Ubr5Q80TP3 Gm18798-201ENSMUST00000187264 1700 ntBASIC10.52□□□□□ -0.72
Ubr5Q80TP3 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Ubr5Q80TP3 Gm21358-201ENSMUST00000191645 1659 ntBASIC10.52□□□□□ -0.72
Ubr5Q80TP3 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Ubr5Q80TP3 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Ubr5Q80TP3 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Ubr5Q80TP3 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC10.52□□□□□ -0.73
Ubr5Q80TP3 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Ubr5Q80TP3 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ubr5Q80TP3 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Ubr5Q80TP3 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC10.52□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms