Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Prpf38bQ80SY5 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Prpf38bQ80SY5 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Prpf38bQ80SY5 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Prpf38bQ80SY5 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Prpf38bQ80SY5 Gm6335-201ENSMUST00000118081 1194 ntBASIC13.17□□□□□ -0.3
Prpf38bQ80SY5 Gm7816-201ENSMUST00000119884 1194 ntBASIC13.17□□□□□ -0.3
Prpf38bQ80SY5 Gm15542-201ENSMUST00000121585 1194 ntBASIC13.17□□□□□ -0.3
Prpf38bQ80SY5 Gm29608-201ENSMUST00000190444 463 ntBASIC13.17□□□□□ -0.3
Prpf38bQ80SY5 Gm43930-201ENSMUST00000203868 845 ntBASIC13.17□□□□□ -0.3
Prpf38bQ80SY5 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC13.17□□□□□ -0.3
Prpf38bQ80SY5 Gm10752-201ENSMUST00000218348 729 ntBASIC13.17□□□□□ -0.3
Prpf38bQ80SY5 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Prpf38bQ80SY5 CT025551.1-201ENSMUST00000223996 692 ntBASIC13.17□□□□□ -0.3
Prpf38bQ80SY5 CT025694.1-201ENSMUST00000226188 934 ntBASIC13.17□□□□□ -0.3
Prpf38bQ80SY5 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Prpf38bQ80SY5 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Prpf38bQ80SY5 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Prpf38bQ80SY5 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Prpf38bQ80SY5 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Prpf38bQ80SY5 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Prpf38bQ80SY5 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Prpf38bQ80SY5 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Prpf38bQ80SY5 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC13.17□□□□□ -0.3
Prpf38bQ80SY5 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Prpf38bQ80SY5 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Prpf38bQ80SY5 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Prpf38bQ80SY5 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Prpf38bQ80SY5 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Prpf38bQ80SY5 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Prpf38bQ80SY5 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Prpf38bQ80SY5 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Prpf38bQ80SY5 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Prpf38bQ80SY5 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Prpf38bQ80SY5 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Prpf38bQ80SY5 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Prpf38bQ80SY5 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Prpf38bQ80SY5 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Prpf38bQ80SY5 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.16□□□□□ -0.3
Prpf38bQ80SY5 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Prpf38bQ80SY5 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Prpf38bQ80SY5 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Prpf38bQ80SY5 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Prpf38bQ80SY5 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Prpf38bQ80SY5 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Prpf38bQ80SY5 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Prpf38bQ80SY5 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Prpf38bQ80SY5 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Prpf38bQ80SY5 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Prpf38bQ80SY5 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Prpf38bQ80SY5 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Prpf38bQ80SY5 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Prpf38bQ80SY5 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Prpf38bQ80SY5 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Prpf38bQ80SY5 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Prpf38bQ80SY5 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC13.16□□□□□ -0.3
Prpf38bQ80SY5 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Prpf38bQ80SY5 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Prpf38bQ80SY5 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Prpf38bQ80SY5 Gm23270-201ENSMUST00000104055 131 ntBASIC13.16□□□□□ -0.3
Prpf38bQ80SY5 Gm23200-201ENSMUST00000104379 132 ntBASIC13.16□□□□□ -0.3
Prpf38bQ80SY5 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC13.16□□□□□ -0.3
Prpf38bQ80SY5 Gm16397-201ENSMUST00000122201 494 ntBASIC13.16□□□□□ -0.3
Prpf38bQ80SY5 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Prpf38bQ80SY5 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC13.16□□□□□ -0.3
Prpf38bQ80SY5 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC13.16□□□□□ -0.3
Prpf38bQ80SY5 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Prpf38bQ80SY5 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.16□□□□□ -0.3
Prpf38bQ80SY5 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Prpf38bQ80SY5 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Prpf38bQ80SY5 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Prpf38bQ80SY5 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Prpf38bQ80SY5 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Prpf38bQ80SY5 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Prpf38bQ80SY5 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Prpf38bQ80SY5 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC13.16□□□□□ -0.3
Prpf38bQ80SY5 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Prpf38bQ80SY5 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Prpf38bQ80SY5 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.16□□□□□ -0.3
Prpf38bQ80SY5 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Prpf38bQ80SY5 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Prpf38bQ80SY5 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Prpf38bQ80SY5 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Prpf38bQ80SY5 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.15□□□□□ -0.3
Prpf38bQ80SY5 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Prpf38bQ80SY5 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Prpf38bQ80SY5 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Prpf38bQ80SY5 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Prpf38bQ80SY5 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Prpf38bQ80SY5 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Prpf38bQ80SY5 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Prpf38bQ80SY5 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Prpf38bQ80SY5 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC13.15□□□□□ -0.3
Prpf38bQ80SY5 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Prpf38bQ80SY5 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Prpf38bQ80SY5 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Prpf38bQ80SY5 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC13.15□□□□□ -0.3
Prpf38bQ80SY5 Gm13316-201ENSMUST00000140537 691 ntBASIC13.15□□□□□ -0.3
Prpf38bQ80SY5 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC13.15□□□□□ -0.3
Prpf38bQ80SY5 Gm18893-201ENSMUST00000198416 943 ntBASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms