Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ctdp1Q7TSG2 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC13.65□□□□□ -0.22
Ctdp1Q7TSG2 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ctdp1Q7TSG2 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ctdp1Q7TSG2 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ctdp1Q7TSG2 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ctdp1Q7TSG2 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ctdp1Q7TSG2 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Ctdp1Q7TSG2 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ctdp1Q7TSG2 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC13.65□□□□□ -0.22
Ctdp1Q7TSG2 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ctdp1Q7TSG2 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC13.65□□□□□ -0.22
Ctdp1Q7TSG2 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ctdp1Q7TSG2 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.23
Ctdp1Q7TSG2 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
Ctdp1Q7TSG2 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.23
Ctdp1Q7TSG2 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC13.64□□□□□ -0.23
Ctdp1Q7TSG2 Gm5912-201ENSMUST00000122282 1438 ntBASIC13.64□□□□□ -0.23
Ctdp1Q7TSG2 Gm9816-201ENSMUST00000122292 1414 ntBASIC13.64□□□□□ -0.23
Ctdp1Q7TSG2 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
Ctdp1Q7TSG2 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ctdp1Q7TSG2 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ctdp1Q7TSG2 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ctdp1Q7TSG2 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ctdp1Q7TSG2 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Ctdp1Q7TSG2 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ctdp1Q7TSG2 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ctdp1Q7TSG2 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ctdp1Q7TSG2 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Ctdp1Q7TSG2 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ctdp1Q7TSG2 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ctdp1Q7TSG2 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Ctdp1Q7TSG2 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ctdp1Q7TSG2 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Ctdp1Q7TSG2 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ctdp1Q7TSG2 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ctdp1Q7TSG2 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ctdp1Q7TSG2 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ctdp1Q7TSG2 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.64□□□□□ -0.23
Ctdp1Q7TSG2 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Ctdp1Q7TSG2 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ctdp1Q7TSG2 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC13.64□□□□□ -0.23
Ctdp1Q7TSG2 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC13.64□□□□□ -0.23
Ctdp1Q7TSG2 Gm5276-201ENSMUST00000196683 1047 ntBASIC13.64□□□□□ -0.23
Ctdp1Q7TSG2 Gm18473-201ENSMUST00000220543 868 ntBASIC13.64□□□□□ -0.23
Ctdp1Q7TSG2 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC13.64□□□□□ -0.23
Ctdp1Q7TSG2 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
Ctdp1Q7TSG2 Gm26035-201ENSMUST00000083065 308 ntBASIC13.64□□□□□ -0.23
Ctdp1Q7TSG2 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ctdp1Q7TSG2 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ctdp1Q7TSG2 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ctdp1Q7TSG2 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ctdp1Q7TSG2 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ctdp1Q7TSG2 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Ctdp1Q7TSG2 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Ctdp1Q7TSG2 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ctdp1Q7TSG2 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Ctdp1Q7TSG2 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ctdp1Q7TSG2 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC13.64□□□□□ -0.23
Ctdp1Q7TSG2 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Ctdp1Q7TSG2 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ctdp1Q7TSG2 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ctdp1Q7TSG2 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ctdp1Q7TSG2 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ctdp1Q7TSG2 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Ctdp1Q7TSG2 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Ctdp1Q7TSG2 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ctdp1Q7TSG2 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ctdp1Q7TSG2 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Ctdp1Q7TSG2 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ctdp1Q7TSG2 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ctdp1Q7TSG2 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ctdp1Q7TSG2 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ctdp1Q7TSG2 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ctdp1Q7TSG2 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ctdp1Q7TSG2 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ctdp1Q7TSG2 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ctdp1Q7TSG2 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ctdp1Q7TSG2 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ctdp1Q7TSG2 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC13.63□□□□□ -0.23
Ctdp1Q7TSG2 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC13.63□□□□□ -0.23
Ctdp1Q7TSG2 Gm17150-201ENSMUST00000165577 381 ntBASIC13.63□□□□□ -0.23
Ctdp1Q7TSG2 Gm8602-201ENSMUST00000184045 607 ntBASIC13.63□□□□□ -0.23
Ctdp1Q7TSG2 Gm27486-201ENSMUST00000184923 80 ntBASIC13.63□□□□□ -0.23
Ctdp1Q7TSG2 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC13.63□□□□□ -0.23
Ctdp1Q7TSG2 Gm44069-201ENSMUST00000204898 506 ntBASIC13.63□□□□□ -0.23
Ctdp1Q7TSG2 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC13.63□□□□□ -0.23
Ctdp1Q7TSG2 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC13.63□□□□□ -0.23
Ctdp1Q7TSG2 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC13.63□□□□□ -0.23
Ctdp1Q7TSG2 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ctdp1Q7TSG2 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Ctdp1Q7TSG2 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ctdp1Q7TSG2 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ctdp1Q7TSG2 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ctdp1Q7TSG2 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ctdp1Q7TSG2 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC13.63□□□□□ -0.23
Ctdp1Q7TSG2 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ctdp1Q7TSG2 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ctdp1Q7TSG2 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Ctdp1Q7TSG2 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms