Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ubfd1Q78JW9 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ubfd1Q78JW9 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ubfd1Q78JW9 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ubfd1Q78JW9 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ubfd1Q78JW9 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ubfd1Q78JW9 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ubfd1Q78JW9 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ubfd1Q78JW9 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.21□□□□□ -0.45
Ubfd1Q78JW9 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.21□□□□□ -0.45
Ubfd1Q78JW9 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ubfd1Q78JW9 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Ubfd1Q78JW9 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ubfd1Q78JW9 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ubfd1Q78JW9 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ubfd1Q78JW9 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
Ubfd1Q78JW9 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ubfd1Q78JW9 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Ubfd1Q78JW9 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Ubfd1Q78JW9 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Ubfd1Q78JW9 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.21□□□□□ -0.45
Ubfd1Q78JW9 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ubfd1Q78JW9 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC12.21□□□□□ -0.45
Ubfd1Q78JW9 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC12.21□□□□□ -0.45
Ubfd1Q78JW9 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC12.21□□□□□ -0.45
Ubfd1Q78JW9 Gm9022-201ENSMUST00000182482 992 ntBASIC12.21□□□□□ -0.45
Ubfd1Q78JW9 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ubfd1Q78JW9 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ubfd1Q78JW9 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.21□□□□□ -0.45
Ubfd1Q78JW9 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ubfd1Q78JW9 Rprl1-202ENSMUST00000198476 238 ntBASIC12.21□□□□□ -0.45
Ubfd1Q78JW9 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC12.21□□□□□ -0.45
Ubfd1Q78JW9 Gm45691-201ENSMUST00000206905 1120 ntBASIC12.21□□□□□ -0.45
Ubfd1Q78JW9 Gm5363-201ENSMUST00000211927 938 ntBASIC12.21□□□□□ -0.45
Ubfd1Q78JW9 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ubfd1Q78JW9 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Ubfd1Q78JW9 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ubfd1Q78JW9 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ubfd1Q78JW9 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ubfd1Q78JW9 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.21□□□□□ -0.45
Ubfd1Q78JW9 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ubfd1Q78JW9 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Ubfd1Q78JW9 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.21□□□□□ -0.46
Ubfd1Q78JW9 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ubfd1Q78JW9 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Ubfd1Q78JW9 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ubfd1Q78JW9 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ubfd1Q78JW9 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.46
Ubfd1Q78JW9 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Ubfd1Q78JW9 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Ubfd1Q78JW9 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ubfd1Q78JW9 Gm43908-201ENSMUST00000205074 1472 ntBASIC12.21□□□□□ -0.46
Ubfd1Q78JW9 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ubfd1Q78JW9 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ubfd1Q78JW9 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ubfd1Q78JW9 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Ubfd1Q78JW9 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ubfd1Q78JW9 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ubfd1Q78JW9 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ubfd1Q78JW9 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ubfd1Q78JW9 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ubfd1Q78JW9 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ubfd1Q78JW9 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ubfd1Q78JW9 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ubfd1Q78JW9 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ubfd1Q78JW9 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ubfd1Q78JW9 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ubfd1Q78JW9 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ubfd1Q78JW9 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ubfd1Q78JW9 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.2□□□□□ -0.46
Ubfd1Q78JW9 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC12.2□□□□□ -0.46
Ubfd1Q78JW9 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ubfd1Q78JW9 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC12.2□□□□□ -0.46
Ubfd1Q78JW9 Gm6963-201ENSMUST00000147879 379 ntBASIC12.2□□□□□ -0.46
Ubfd1Q78JW9 Gm8856-201ENSMUST00000185254 1144 ntBASIC12.2□□□□□ -0.46
Ubfd1Q78JW9 Gm37466-201ENSMUST00000195692 652 ntBASIC12.2□□□□□ -0.46
Ubfd1Q78JW9 Gm45186-201ENSMUST00000206874 478 ntBASIC12.2□□□□□ -0.46
Ubfd1Q78JW9 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC12.2□□□□□ -0.46
Ubfd1Q78JW9 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ubfd1Q78JW9 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ubfd1Q78JW9 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ubfd1Q78JW9 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ubfd1Q78JW9 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Ubfd1Q78JW9 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ubfd1Q78JW9 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC12.2□□□□□ -0.46
Ubfd1Q78JW9 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Ubfd1Q78JW9 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ubfd1Q78JW9 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ubfd1Q78JW9 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ubfd1Q78JW9 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ubfd1Q78JW9 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ubfd1Q78JW9 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ubfd1Q78JW9 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ubfd1Q78JW9 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ubfd1Q78JW9 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.2□□□□□ -0.46
Ubfd1Q78JW9 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Ubfd1Q78JW9 AC113441.2-201ENSMUST00000221538 1468 ntBASIC12.2□□□□□ -0.46
Ubfd1Q78JW9 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ubfd1Q78JW9 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ubfd1Q78JW9 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 82.5 ms