Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.33□□□□□ -0.44
Scaf4Q6PFF0 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scaf4Q6PFF0 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scaf4Q6PFF0 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scaf4Q6PFF0 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Scaf4Q6PFF0 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scaf4Q6PFF0 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scaf4Q6PFF0 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scaf4Q6PFF0 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scaf4Q6PFF0 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Scaf4Q6PFF0 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scaf4Q6PFF0 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scaf4Q6PFF0 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scaf4Q6PFF0 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.32□□□□□ -0.44
Scaf4Q6PFF0 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scaf4Q6PFF0 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scaf4Q6PFF0 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Scaf4Q6PFF0 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Scaf4Q6PFF0 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Scaf4Q6PFF0 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Scaf4Q6PFF0 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scaf4Q6PFF0 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scaf4Q6PFF0 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scaf4Q6PFF0 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Scaf4Q6PFF0 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scaf4Q6PFF0 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC12.32□□□□□ -0.44
Scaf4Q6PFF0 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC12.32□□□□□ -0.44
Scaf4Q6PFF0 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Scaf4Q6PFF0 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Scaf4Q6PFF0 Gm16479-201ENSMUST00000121706 932 ntBASIC12.32□□□□□ -0.44
Scaf4Q6PFF0 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC12.32□□□□□ -0.44
Scaf4Q6PFF0 Gm17208-201ENSMUST00000168388 535 ntBASIC12.32□□□□□ -0.44
Scaf4Q6PFF0 Gm37042-201ENSMUST00000193816 581 ntBASIC12.32□□□□□ -0.44
Scaf4Q6PFF0 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Scaf4Q6PFF0 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Scaf4Q6PFF0 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.32□□□□□ -0.44
Scaf4Q6PFF0 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.32□□□□□ -0.44
Scaf4Q6PFF0 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scaf4Q6PFF0 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Scaf4Q6PFF0 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scaf4Q6PFF0 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scaf4Q6PFF0 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Scaf4Q6PFF0 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scaf4Q6PFF0 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scaf4Q6PFF0 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scaf4Q6PFF0 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scaf4Q6PFF0 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Scaf4Q6PFF0 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Scaf4Q6PFF0 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Scaf4Q6PFF0 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scaf4Q6PFF0 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scaf4Q6PFF0 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scaf4Q6PFF0 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Scaf4Q6PFF0 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Scaf4Q6PFF0 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scaf4Q6PFF0 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scaf4Q6PFF0 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Scaf4Q6PFF0 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Scaf4Q6PFF0 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Scaf4Q6PFF0 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scaf4Q6PFF0 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scaf4Q6PFF0 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scaf4Q6PFF0 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scaf4Q6PFF0 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Scaf4Q6PFF0 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scaf4Q6PFF0 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scaf4Q6PFF0 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scaf4Q6PFF0 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scaf4Q6PFF0 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scaf4Q6PFF0 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scaf4Q6PFF0 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scaf4Q6PFF0 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.31□□□□□ -0.44
Scaf4Q6PFF0 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC12.31□□□□□ -0.44
Scaf4Q6PFF0 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC12.31□□□□□ -0.44
Scaf4Q6PFF0 Gm37917-201ENSMUST00000194711 392 ntBASIC12.31□□□□□ -0.44
Scaf4Q6PFF0 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.31□□□□□ -0.44
Scaf4Q6PFF0 Gm44872-201ENSMUST00000207864 420 ntBASIC12.31□□□□□ -0.44
Scaf4Q6PFF0 Gm8463-201ENSMUST00000208573 613 ntBASIC12.31□□□□□ -0.44
Scaf4Q6PFF0 AC155286.1-201ENSMUST00000218632 448 ntBASIC12.31□□□□□ -0.44
Scaf4Q6PFF0 Gm8598-201ENSMUST00000221184 836 ntBASIC12.31□□□□□ -0.44
Scaf4Q6PFF0 AC125117.1-201ENSMUST00000228121 468 ntBASIC12.31□□□□□ -0.44
Scaf4Q6PFF0 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scaf4Q6PFF0 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Scaf4Q6PFF0 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scaf4Q6PFF0 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Scaf4Q6PFF0 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC12.31□□□□□ -0.44
Scaf4Q6PFF0 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC12.31□□□□□ -0.44
Scaf4Q6PFF0 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scaf4Q6PFF0 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scaf4Q6PFF0 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Scaf4Q6PFF0 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12.31□□□□□ -0.44
Scaf4Q6PFF0 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scaf4Q6PFF0 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scaf4Q6PFF0 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Scaf4Q6PFF0 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scaf4Q6PFF0 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Scaf4Q6PFF0 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scaf4Q6PFF0 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scaf4Q6PFF0 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scaf4Q6PFF0 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms