Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smarcc2Q6PDG5 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Smarcc2Q6PDG5 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smarcc2Q6PDG5 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smarcc2Q6PDG5 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smarcc2Q6PDG5 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Smarcc2Q6PDG5 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smarcc2Q6PDG5 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
Smarcc2Q6PDG5 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smarcc2Q6PDG5 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC14.6□□□□□ -0.07
Smarcc2Q6PDG5 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Smarcc2Q6PDG5 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smarcc2Q6PDG5 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Smarcc2Q6PDG5 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smarcc2Q6PDG5 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smarcc2Q6PDG5 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Smarcc2Q6PDG5 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Smarcc2Q6PDG5 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Smarcc2Q6PDG5 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Smarcc2Q6PDG5 Gm5053-201ENSMUST00000208361 1678 ntBASIC14.59□□□□□ -0.07
Smarcc2Q6PDG5 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Smarcc2Q6PDG5 AC126262.1-201ENSMUST00000221802 1904 ntBASIC14.59□□□□□ -0.07
Smarcc2Q6PDG5 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Smarcc2Q6PDG5 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Smarcc2Q6PDG5 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Smarcc2Q6PDG5 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC14.59□□□□□ -0.07
Smarcc2Q6PDG5 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC14.59□□□□□ -0.07
Smarcc2Q6PDG5 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Smarcc2Q6PDG5 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC14.59□□□□□ -0.07
Smarcc2Q6PDG5 Gm27516-201ENSMUST00000184237 98 ntBASIC14.59□□□□□ -0.07
Smarcc2Q6PDG5 Mir6420-201ENSMUST00000185032 102 ntBASIC14.59□□□□□ -0.07
Smarcc2Q6PDG5 Gm29396-201ENSMUST00000185659 716 ntBASIC14.59□□□□□ -0.07
Smarcc2Q6PDG5 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Smarcc2Q6PDG5 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Smarcc2Q6PDG5 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC14.59□□□□□ -0.07
Smarcc2Q6PDG5 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC14.59□□□□□ -0.07
Smarcc2Q6PDG5 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Smarcc2Q6PDG5 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Smarcc2Q6PDG5 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC14.59□□□□□ -0.07
Smarcc2Q6PDG5 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Smarcc2Q6PDG5 Gm45930-201ENSMUST00000221330 292 ntBASIC14.59□□□□□ -0.07
Smarcc2Q6PDG5 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Smarcc2Q6PDG5 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Smarcc2Q6PDG5 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Smarcc2Q6PDG5 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Smarcc2Q6PDG5 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC14.59□□□□□ -0.07
Smarcc2Q6PDG5 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Smarcc2Q6PDG5 AC164702.1-201ENSMUST00000220135 2212 ntBASIC14.59□□□□□ -0.07
Smarcc2Q6PDG5 Gm37827-201ENSMUST00000194486 1542 ntBASIC14.59□□□□□ -0.07
Smarcc2Q6PDG5 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
Smarcc2Q6PDG5 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Smarcc2Q6PDG5 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Smarcc2Q6PDG5 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Smarcc2Q6PDG5 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Smarcc2Q6PDG5 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Smarcc2Q6PDG5 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Smarcc2Q6PDG5 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Smarcc2Q6PDG5 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Smarcc2Q6PDG5 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Smarcc2Q6PDG5 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Smarcc2Q6PDG5 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Smarcc2Q6PDG5 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
Smarcc2Q6PDG5 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
Smarcc2Q6PDG5 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Smarcc2Q6PDG5 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Smarcc2Q6PDG5 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Smarcc2Q6PDG5 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Smarcc2Q6PDG5 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smarcc2Q6PDG5 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Smarcc2Q6PDG5 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smarcc2Q6PDG5 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smarcc2Q6PDG5 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC14.58□□□□□ -0.08
Smarcc2Q6PDG5 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smarcc2Q6PDG5 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC14.58□□□□□ -0.08
Smarcc2Q6PDG5 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smarcc2Q6PDG5 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC14.58□□□□□ -0.08
Smarcc2Q6PDG5 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Smarcc2Q6PDG5 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Smarcc2Q6PDG5 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC14.58□□□□□ -0.08
Smarcc2Q6PDG5 Gm38158-201ENSMUST00000194617 339 ntBASIC14.58□□□□□ -0.08
Smarcc2Q6PDG5 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC14.58□□□□□ -0.08
Smarcc2Q6PDG5 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC14.58□□□□□ -0.08
Smarcc2Q6PDG5 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smarcc2Q6PDG5 Gm17383-201ENSMUST00000078739 1041 ntBASIC14.58□□□□□ -0.08
Smarcc2Q6PDG5 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Smarcc2Q6PDG5 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Smarcc2Q6PDG5 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC14.58□□□□□ -0.08
Smarcc2Q6PDG5 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smarcc2Q6PDG5 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smarcc2Q6PDG5 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smarcc2Q6PDG5 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smarcc2Q6PDG5 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smarcc2Q6PDG5 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smarcc2Q6PDG5 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Smarcc2Q6PDG5 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Smarcc2Q6PDG5 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smarcc2Q6PDG5 Nupl1-206ENSMUST00000225111 2936 ntBASIC14.58□□□□□ -0.08
Smarcc2Q6PDG5 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Smarcc2Q6PDG5 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smarcc2Q6PDG5 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms