Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Sp140Q6NSQ5 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Sp140Q6NSQ5 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.69□□□□□ -0.38
Sp140Q6NSQ5 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sp140Q6NSQ5 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.69□□□□□ -0.38
Sp140Q6NSQ5 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.69□□□□□ -0.38
Sp140Q6NSQ5 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sp140Q6NSQ5 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sp140Q6NSQ5 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.69□□□□□ -0.38
Sp140Q6NSQ5 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sp140Q6NSQ5 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.69□□□□□ -0.38
Sp140Q6NSQ5 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sp140Q6NSQ5 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sp140Q6NSQ5 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
Sp140Q6NSQ5 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sp140Q6NSQ5 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.68□□□□□ -0.38
Sp140Q6NSQ5 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Sp140Q6NSQ5 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sp140Q6NSQ5 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sp140Q6NSQ5 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sp140Q6NSQ5 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sp140Q6NSQ5 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sp140Q6NSQ5 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sp140Q6NSQ5 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sp140Q6NSQ5 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sp140Q6NSQ5 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sp140Q6NSQ5 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sp140Q6NSQ5 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Sp140Q6NSQ5 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sp140Q6NSQ5 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sp140Q6NSQ5 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sp140Q6NSQ5 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sp140Q6NSQ5 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sp140Q6NSQ5 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sp140Q6NSQ5 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sp140Q6NSQ5 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.68□□□□□ -0.38
Sp140Q6NSQ5 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sp140Q6NSQ5 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC12.68□□□□□ -0.38
Sp140Q6NSQ5 Gm25261-201ENSMUST00000157416 134 ntBASIC12.68□□□□□ -0.38
Sp140Q6NSQ5 Gm3890-201ENSMUST00000182416 207 ntBASIC12.68□□□□□ -0.38
Sp140Q6NSQ5 Gm9022-201ENSMUST00000182482 992 ntBASIC12.68□□□□□ -0.38
Sp140Q6NSQ5 Gm27731-201ENSMUST00000185192 107 ntBASIC12.68□□□□□ -0.38
Sp140Q6NSQ5 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12.68□□□□□ -0.38
Sp140Q6NSQ5 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.68□□□□□ -0.38
Sp140Q6NSQ5 Gm19184-201ENSMUST00000196798 928 ntBASIC12.68□□□□□ -0.38
Sp140Q6NSQ5 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC12.68□□□□□ -0.38
Sp140Q6NSQ5 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.68□□□□□ -0.38
Sp140Q6NSQ5 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sp140Q6NSQ5 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sp140Q6NSQ5 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sp140Q6NSQ5 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.68□□□□□ -0.38
Sp140Q6NSQ5 Gm22058-201ENSMUST00000083393 310 ntBASIC12.68□□□□□ -0.38
Sp140Q6NSQ5 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.68□□□□□ -0.38
Sp140Q6NSQ5 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sp140Q6NSQ5 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Sp140Q6NSQ5 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sp140Q6NSQ5 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Sp140Q6NSQ5 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sp140Q6NSQ5 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sp140Q6NSQ5 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sp140Q6NSQ5 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sp140Q6NSQ5 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sp140Q6NSQ5 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Sp140Q6NSQ5 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sp140Q6NSQ5 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sp140Q6NSQ5 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Sp140Q6NSQ5 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sp140Q6NSQ5 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
Sp140Q6NSQ5 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sp140Q6NSQ5 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sp140Q6NSQ5 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sp140Q6NSQ5 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Sp140Q6NSQ5 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sp140Q6NSQ5 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sp140Q6NSQ5 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sp140Q6NSQ5 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sp140Q6NSQ5 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sp140Q6NSQ5 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sp140Q6NSQ5 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sp140Q6NSQ5 Pck2-205ENSMUST00000226352 2784 ntBASIC12.67□□□□□ -0.38
Sp140Q6NSQ5 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sp140Q6NSQ5 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sp140Q6NSQ5 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sp140Q6NSQ5 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Sp140Q6NSQ5 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sp140Q6NSQ5 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sp140Q6NSQ5 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.67□□□□□ -0.38
Sp140Q6NSQ5 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.67□□□□□ -0.38
Sp140Q6NSQ5 Gm12384-201ENSMUST00000119228 919 ntBASIC12.67□□□□□ -0.38
Sp140Q6NSQ5 Gm14660-201ENSMUST00000119809 575 ntBASIC12.67□□□□□ -0.38
Sp140Q6NSQ5 Gm13315-201ENSMUST00000120376 991 ntBASIC12.67□□□□□ -0.38
Sp140Q6NSQ5 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.67□□□□□ -0.38
Sp140Q6NSQ5 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sp140Q6NSQ5 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sp140Q6NSQ5 Gm5745-201ENSMUST00000183748 313 ntBASIC12.67□□□□□ -0.38
Sp140Q6NSQ5 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sp140Q6NSQ5 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sp140Q6NSQ5 Gm37748-201ENSMUST00000194379 1140 ntBASIC12.67□□□□□ -0.38
Sp140Q6NSQ5 Gm18584-201ENSMUST00000203098 964 ntBASIC12.67□□□□□ -0.38
Sp140Q6NSQ5 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms