Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC12.08□□□□□ -0.48
Sdc3Q64519 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sdc3Q64519 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sdc3Q64519 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sdc3Q64519 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.08□□□□□ -0.48
Sdc3Q64519 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sdc3Q64519 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Sdc3Q64519 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Sdc3Q64519 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sdc3Q64519 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
Sdc3Q64519 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sdc3Q64519 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sdc3Q64519 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sdc3Q64519 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Sdc3Q64519 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sdc3Q64519 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sdc3Q64519 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
Sdc3Q64519 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sdc3Q64519 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sdc3Q64519 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sdc3Q64519 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sdc3Q64519 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Sdc3Q64519 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sdc3Q64519 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sdc3Q64519 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sdc3Q64519 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.07□□□□□ -0.48
Sdc3Q64519 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Sdc3Q64519 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sdc3Q64519 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sdc3Q64519 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.07□□□□□ -0.48
Sdc3Q64519 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sdc3Q64519 Gm37014-201ENSMUST00000194723 2253 ntBASIC12.07□□□□□ -0.48
Sdc3Q64519 Gm45011-201ENSMUST00000207620 2297 ntBASIC12.07□□□□□ -0.48
Sdc3Q64519 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sdc3Q64519 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sdc3Q64519 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.07□□□□□ -0.48
Sdc3Q64519 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sdc3Q64519 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12.07□□□□□ -0.48
Sdc3Q64519 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sdc3Q64519 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.07□□□□□ -0.48
Sdc3Q64519 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.07□□□□□ -0.48
Sdc3Q64519 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sdc3Q64519 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
Sdc3Q64519 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sdc3Q64519 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Sdc3Q64519 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sdc3Q64519 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.07□□□□□ -0.48
Sdc3Q64519 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sdc3Q64519 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC12.07□□□□□ -0.48
Sdc3Q64519 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sdc3Q64519 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.07□□□□□ -0.48
Sdc3Q64519 Morn2-202ENSMUST00000227729 656 ntBASIC12.07□□□□□ -0.48
Sdc3Q64519 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sdc3Q64519 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sdc3Q64519 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sdc3Q64519 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sdc3Q64519 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sdc3Q64519 Rassf8-202ENSMUST00000058538 1131 ntBASIC12.07□□□□□ -0.48
Sdc3Q64519 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Sdc3Q64519 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.07□□□□□ -0.48
Sdc3Q64519 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sdc3Q64519 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sdc3Q64519 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sdc3Q64519 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.07□□□□□ -0.48
Sdc3Q64519 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Sdc3Q64519 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sdc3Q64519 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sdc3Q64519 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.07□□□□□ -0.48
Sdc3Q64519 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sdc3Q64519 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sdc3Q64519 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sdc3Q64519 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sdc3Q64519 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sdc3Q64519 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sdc3Q64519 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sdc3Q64519 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sdc3Q64519 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sdc3Q64519 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sdc3Q64519 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sdc3Q64519 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
Sdc3Q64519 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sdc3Q64519 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.06□□□□□ -0.48
Sdc3Q64519 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sdc3Q64519 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Sdc3Q64519 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.06□□□□□ -0.48
Sdc3Q64519 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sdc3Q64519 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sdc3Q64519 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Sdc3Q64519 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Sdc3Q64519 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.06□□□□□ -0.48
Sdc3Q64519 Gm38092-201ENSMUST00000195600 653 ntBASIC12.06□□□□□ -0.48
Sdc3Q64519 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Sdc3Q64519 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.06□□□□□ -0.48
Sdc3Q64519 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC12.06□□□□□ -0.48
Sdc3Q64519 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.06□□□□□ -0.48
Sdc3Q64519 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sdc3Q64519 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sdc3Q64519 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Sdc3Q64519 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Sdc3Q64519 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 127.9 ms