Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scn9aQ62205 n-R5s211-201ENSMUST00000093689 119 ntBASIC14.45□□□□□ -0.1
Scn9aQ62205 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.45□□□□□ -0.1
Scn9aQ62205 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Scn9aQ62205 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Scn9aQ62205 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Scn9aQ62205 Gm7537-201ENSMUST00000221660 1414 ntBASIC14.45□□□□□ -0.1
Scn9aQ62205 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scn9aQ62205 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scn9aQ62205 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Scn9aQ62205 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Scn9aQ62205 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scn9aQ62205 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scn9aQ62205 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Scn9aQ62205 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn9aQ62205 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Scn9aQ62205 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Scn9aQ62205 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn9aQ62205 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Scn9aQ62205 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn9aQ62205 Gm15784-201ENSMUST00000120260 1462 ntBASIC14.44□□□□□ -0.1
Scn9aQ62205 Gm45643-201ENSMUST00000211364 1484 ntBASIC14.44□□□□□ -0.1
Scn9aQ62205 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Scn9aQ62205 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC14.44□□□□□ -0.1
Scn9aQ62205 Ap3s1-202ENSMUST00000224622 978 ntBASIC14.44□□□□□ -0.1
Scn9aQ62205 AC136376.2-201ENSMUST00000228819 490 ntBASIC14.44□□□□□ -0.1
Scn9aQ62205 Gm5537-201ENSMUST00000091117 1252 ntBASIC14.44□□□□□ -0.1
Scn9aQ62205 Gm45266-201ENSMUST00000210111 2173 ntBASIC14.44□□□□□ -0.1
Scn9aQ62205 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn9aQ62205 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn9aQ62205 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Scn9aQ62205 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn9aQ62205 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Scn9aQ62205 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn9aQ62205 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
Scn9aQ62205 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn9aQ62205 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn9aQ62205 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn9aQ62205 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn9aQ62205 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Scn9aQ62205 Gm8815-201ENSMUST00000173809 620 ntBASIC14.43□□□□□ -0.1
Scn9aQ62205 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn9aQ62205 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Scn9aQ62205 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC14.43□□□□□ -0.1
Scn9aQ62205 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn9aQ62205 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn9aQ62205 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn9aQ62205 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn9aQ62205 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Scn9aQ62205 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn9aQ62205 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Scn9aQ62205 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn9aQ62205 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn9aQ62205 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Scn9aQ62205 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn9aQ62205 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Scn9aQ62205 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn9aQ62205 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn9aQ62205 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Scn9aQ62205 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn9aQ62205 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Scn9aQ62205 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Scn9aQ62205 Mir6923-201ENSMUST00000184592 72 ntBASIC14.43□□□□□ -0.1
Scn9aQ62205 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Scn9aQ62205 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn9aQ62205 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn9aQ62205 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn9aQ62205 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC14.43□□□□□ -0.1
Scn9aQ62205 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn9aQ62205 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Scn9aQ62205 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Scn9aQ62205 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn9aQ62205 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.42□□□□□ -0.1
Scn9aQ62205 Gm10152-201ENSMUST00000193475 1344 ntBASIC14.42□□□□□ -0.1
Scn9aQ62205 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Scn9aQ62205 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Scn9aQ62205 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn9aQ62205 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn9aQ62205 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC14.42□□□□□ -0.1
Scn9aQ62205 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC14.42□□□□□ -0.1
Scn9aQ62205 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Scn9aQ62205 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Scn9aQ62205 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn9aQ62205 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn9aQ62205 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn9aQ62205 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Scn9aQ62205 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Scn9aQ62205 Zfp637-210ENSMUST00000164472 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn9aQ62205 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC14.42□□□□□ -0.1
Scn9aQ62205 Gm3017-201ENSMUST00000203603 1126 ntBASIC14.42□□□□□ -0.1
Scn9aQ62205 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn9aQ62205 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Scn9aQ62205 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Scn9aQ62205 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn9aQ62205 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Scn9aQ62205 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Scn9aQ62205 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn9aQ62205 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC14.42□□□□□ -0.1
Scn9aQ62205 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn9aQ62205 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms