Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gli3Q61602 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gli3Q61602 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gli3Q61602 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gli3Q61602 Gm42432-201ENSMUST00000197902 1617 ntBASIC16.41■□□□□ 0.22
Gli3Q61602 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
Gli3Q61602 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Gli3Q61602 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Gli3Q61602 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gli3Q61602 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
Gli3Q61602 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gli3Q61602 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Gli3Q61602 Ppp1r32-201ENSMUST00000038842 1458 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gli3Q61602 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gli3Q61602 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Gli3Q61602 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gli3Q61602 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Gli3Q61602 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gli3Q61602 Gm12194-201ENSMUST00000117756 1012 ntBASIC16.4■□□□□ 0.22
Gli3Q61602 Gm16537-201ENSMUST00000161529 702 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Gli3Q61602 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Gli3Q61602 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC16.4■□□□□ 0.22
Gli3Q61602 Cdhr4-208ENSMUST00000176373 492 ntTSL 5 BASIC16.4■□□□□ 0.22
Gli3Q61602 2610016A17Rik-201ENSMUST00000185211 474 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Gli3Q61602 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gli3Q61602 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Gli3Q61602 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gli3Q61602 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC16.4■□□□□ 0.22
Gli3Q61602 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gli3Q61602 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gli3Q61602 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
Gli3Q61602 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
Gli3Q61602 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gli3Q61602 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gli3Q61602 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gli3Q61602 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gli3Q61602 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gli3Q61602 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
Gli3Q61602 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gli3Q61602 Gm13192-201ENSMUST00000101199 208 ntBASIC16.39■□□□□ 0.21
Gli3Q61602 Gm5638-201ENSMUST00000118618 1258 ntBASIC16.39■□□□□ 0.21
Gli3Q61602 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Gli3Q61602 Gm10443-201ENSMUST00000119024 210 ntBASIC16.39■□□□□ 0.21
Gli3Q61602 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC16.39■□□□□ 0.21
Gli3Q61602 C030013C21Rik-201ENSMUST00000133400 795 ntTSL 3 BASIC16.39■□□□□ 0.21
Gli3Q61602 Gm4775-201ENSMUST00000169588 402 ntBASIC16.39■□□□□ 0.21
Gli3Q61602 Gm20694-201ENSMUST00000176943 404 ntBASIC16.39■□□□□ 0.21
Gli3Q61602 Gm20568-201ENSMUST00000197129 208 ntBASIC16.39■□□□□ 0.21
Gli3Q61602 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC16.39■□□□□ 0.21
Gli3Q61602 Izumo1r-202ENSMUST00000069408 1172 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Gli3Q61602 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Gli3Q61602 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gli3Q61602 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Gli3Q61602 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gli3Q61602 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gli3Q61602 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gli3Q61602 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Gli3Q61602 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gli3Q61602 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
Gli3Q61602 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gli3Q61602 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Gli3Q61602 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gli3Q61602 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gli3Q61602 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gli3Q61602 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gli3Q61602 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gli3Q61602 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gli3Q61602 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Gli3Q61602 Gm23769-201ENSMUST00000104441 121 ntBASIC16.38■□□□□ 0.21
Gli3Q61602 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Gli3Q61602 Gm14760-201ENSMUST00000121831 999 ntBASIC16.38■□□□□ 0.21
Gli3Q61602 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Gli3Q61602 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC16.38■□□□□ 0.21
Gli3Q61602 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC16.38■□□□□ 0.21
Gli3Q61602 Gm17931-201ENSMUST00000208132 634 ntBASIC16.38■□□□□ 0.21
Gli3Q61602 Gm18035-201ENSMUST00000211962 589 ntBASIC16.38■□□□□ 0.21
Gli3Q61602 AC162938.2-202ENSMUST00000215497 722 ntTSL 5 BASIC16.38■□□□□ 0.21
Gli3Q61602 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gli3Q61602 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Gli3Q61602 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gli3Q61602 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gli3Q61602 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Gli3Q61602 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Gli3Q61602 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gli3Q61602 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC16.38■□□□□ 0.21
Gli3Q61602 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Gli3Q61602 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gli3Q61602 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gli3Q61602 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gli3Q61602 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gli3Q61602 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC16.38■□□□□ 0.21
Gli3Q61602 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Gli3Q61602 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Gli3Q61602 Nifk-202ENSMUST00000112688 849 ntTSL 5 BASIC16.38■□□□□ 0.21
Gli3Q61602 Ppt1-204ENSMUST00000121870 986 ntTSL 2 BASIC16.38■□□□□ 0.21
Gli3Q61602 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC16.38■□□□□ 0.21
Gli3Q61602 Gm43547-201ENSMUST00000197729 328 ntBASIC16.38■□□□□ 0.21
Gli3Q61602 C230062I16Rik-203ENSMUST00000208015 648 ntTSL 3 BASIC16.38■□□□□ 0.21
Gli3Q61602 CT025603.1-201ENSMUST00000224040 448 ntBASIC16.38■□□□□ 0.21
Gli3Q61602 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms