Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Foxc1Q61572 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Foxc1Q61572 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Foxc1Q61572 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Foxc1Q61572 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Foxc1Q61572 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Foxc1Q61572 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Foxc1Q61572 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Foxc1Q61572 Gm15544-201ENSMUST00000118776 1531 ntBASIC9.47□□□□□ -0.89
Foxc1Q61572 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Foxc1Q61572 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Foxc1Q61572 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Foxc1Q61572 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Foxc1Q61572 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Foxc1Q61572 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Foxc1Q61572 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Foxc1Q61572 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Foxc1Q61572 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Foxc1Q61572 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Foxc1Q61572 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC9.47□□□□□ -0.89
Foxc1Q61572 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Foxc1Q61572 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC9.47□□□□□ -0.89
Foxc1Q61572 4930448D08Rik-201ENSMUST00000149958 1247 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Foxc1Q61572 Snora78-201ENSMUST00000158630 128 ntBASIC9.47□□□□□ -0.89
Foxc1Q61572 1700129C05Rik-203ENSMUST00000162271 325 ntAPPRIS ALT2 TSL 3 BASIC9.47□□□□□ -0.89
Foxc1Q61572 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Foxc1Q61572 Gm20641-201ENSMUST00000176069 615 ntTSL 3 BASIC9.47□□□□□ -0.89
Foxc1Q61572 Gm27731-201ENSMUST00000185192 107 ntBASIC9.47□□□□□ -0.89
Foxc1Q61572 Gm29649-201ENSMUST00000185649 419 ntBASIC9.47□□□□□ -0.89
Foxc1Q61572 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Foxc1Q61572 Gm43177-201ENSMUST00000197032 1107 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Foxc1Q61572 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC9.47□□□□□ -0.89
Foxc1Q61572 Gm6590-201ENSMUST00000203343 687 ntBASIC9.47□□□□□ -0.89
Foxc1Q61572 Gm39307-201ENSMUST00000216780 1037 ntTSL 5 BASIC9.47□□□□□ -0.89
Foxc1Q61572 1700124M09Rik-201ENSMUST00000217047 305 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Foxc1Q61572 AC154646.1-201ENSMUST00000225011 1092 ntBASIC9.47□□□□□ -0.89
Foxc1Q61572 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Foxc1Q61572 Ms4a4b-201ENSMUST00000035258 1244 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Foxc1Q61572 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Foxc1Q61572 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Foxc1Q61572 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Foxc1Q61572 Vmn1r195-201ENSMUST00000091736 1088 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Foxc1Q61572 Cbx3-202ENSMUST00000094623 1080 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Foxc1Q61572 Gm20554-201ENSMUST00000177421 2352 ntBASIC9.47□□□□□ -0.89
Foxc1Q61572 AC154747.3-201ENSMUST00000224471 3470 ntBASIC9.47□□□□□ -0.89
Foxc1Q61572 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Foxc1Q61572 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Foxc1Q61572 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Foxc1Q61572 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC9.47□□□□□ -0.89
Foxc1Q61572 Gm10040-201ENSMUST00000080726 1662 ntBASIC9.47□□□□□ -0.89
Foxc1Q61572 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Foxc1Q61572 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Foxc1Q61572 Gm38368-201ENSMUST00000193181 1335 ntBASIC9.47□□□□□ -0.89
Foxc1Q61572 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Foxc1Q61572 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Foxc1Q61572 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Foxc1Q61572 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Foxc1Q61572 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Foxc1Q61572 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Foxc1Q61572 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Foxc1Q61572 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Foxc1Q61572 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Foxc1Q61572 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Foxc1Q61572 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Foxc1Q61572 AC096628.2-201ENSMUST00000225443 1413 ntBASIC9.47□□□□□ -0.89
Foxc1Q61572 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Foxc1Q61572 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Foxc1Q61572 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Foxc1Q61572 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Foxc1Q61572 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Foxc1Q61572 AC131068.2-201ENSMUST00000226175 1453 ntBASIC9.47□□□□□ -0.89
Foxc1Q61572 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC9.46□□□□□ -0.89
Foxc1Q61572 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Foxc1Q61572 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
Foxc1Q61572 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Foxc1Q61572 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Foxc1Q61572 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Foxc1Q61572 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Foxc1Q61572 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Foxc1Q61572 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Foxc1Q61572 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
Foxc1Q61572 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Foxc1Q61572 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Foxc1Q61572 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Foxc1Q61572 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Foxc1Q61572 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Foxc1Q61572 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Foxc1Q61572 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Foxc1Q61572 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC9.46□□□□□ -0.9
Foxc1Q61572 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Foxc1Q61572 Gm8213-201ENSMUST00000118191 441 ntBASIC9.46□□□□□ -0.9
Foxc1Q61572 Gm11835-201ENSMUST00000120635 663 ntBASIC9.46□□□□□ -0.9
Foxc1Q61572 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Foxc1Q61572 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC9.46□□□□□ -0.9
Foxc1Q61572 4930440I19Rik-202ENSMUST00000145972 676 ntTSL 2 BASIC9.46□□□□□ -0.9
Foxc1Q61572 Gm23776-201ENSMUST00000158993 325 ntBASIC9.46□□□□□ -0.9
Foxc1Q61572 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC9.46□□□□□ -0.9
Foxc1Q61572 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC9.46□□□□□ -0.9
Foxc1Q61572 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC9.46□□□□□ -0.9
Foxc1Q61572 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC9.46□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 107.1 ms