Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 AC164426.2-201ENSMUST00000225993 2492 ntBASIC11.71□□□□□ -0.53
Sox17Q61473 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sox17Q61473 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sox17Q61473 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Sox17Q61473 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC11.71□□□□□ -0.53
Sox17Q61473 Gm37542-201ENSMUST00000192563 2832 ntBASIC11.71□□□□□ -0.53
Sox17Q61473 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Sox17Q61473 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sox17Q61473 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Sox17Q61473 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sox17Q61473 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sox17Q61473 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Sox17Q61473 Gm5687-201ENSMUST00000118252 640 ntBASIC11.71□□□□□ -0.53
Sox17Q61473 Gm14704-201ENSMUST00000120300 874 ntBASIC11.71□□□□□ -0.53
Sox17Q61473 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
Sox17Q61473 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Sox17Q61473 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Sox17Q61473 Gm5354-201ENSMUST00000182417 973 ntBASIC11.71□□□□□ -0.53
Sox17Q61473 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC11.71□□□□□ -0.53
Sox17Q61473 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Sox17Q61473 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC11.71□□□□□ -0.53
Sox17Q61473 Gm42612-201ENSMUST00000197986 623 ntBASIC11.71□□□□□ -0.53
Sox17Q61473 Gm43170-201ENSMUST00000199827 612 ntBASIC11.71□□□□□ -0.53
Sox17Q61473 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sox17Q61473 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC11.71□□□□□ -0.53
Sox17Q61473 Hist1h2al-201ENSMUST00000091708 339 ntBASIC11.71□□□□□ -0.53
Sox17Q61473 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Sox17Q61473 Gm37849-201ENSMUST00000194722 1881 ntBASIC11.71□□□□□ -0.53
Sox17Q61473 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sox17Q61473 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sox17Q61473 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sox17Q61473 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sox17Q61473 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sox17Q61473 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Sox17Q61473 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sox17Q61473 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sox17Q61473 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sox17Q61473 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sox17Q61473 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Sox17Q61473 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.54
Sox17Q61473 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Sox17Q61473 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
Sox17Q61473 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.54
Sox17Q61473 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Sox17Q61473 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Sox17Q61473 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Sox17Q61473 Gm19692-201ENSMUST00000203856 2084 ntBASIC11.71□□□□□ -0.54
Sox17Q61473 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox17Q61473 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox17Q61473 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC11.7□□□□□ -0.54
Sox17Q61473 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox17Q61473 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox17Q61473 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sox17Q61473 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox17Q61473 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox17Q61473 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox17Q61473 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox17Q61473 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox17Q61473 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox17Q61473 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox17Q61473 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox17Q61473 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC11.7□□□□□ -0.54
Sox17Q61473 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Sox17Q61473 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC11.7□□□□□ -0.54
Sox17Q61473 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox17Q61473 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC11.7□□□□□ -0.54
Sox17Q61473 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sox17Q61473 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox17Q61473 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
Sox17Q61473 Gm24694-201ENSMUST00000180054 110 ntBASIC11.7□□□□□ -0.54
Sox17Q61473 Gm27663-201ENSMUST00000184839 110 ntBASIC11.7□□□□□ -0.54
Sox17Q61473 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC11.7□□□□□ -0.54
Sox17Q61473 Gm6983-201ENSMUST00000214912 628 ntBASIC11.7□□□□□ -0.54
Sox17Q61473 AC156560.2-201ENSMUST00000221232 264 ntBASIC11.7□□□□□ -0.54
Sox17Q61473 AC132863.2-201ENSMUST00000226643 799 ntBASIC11.7□□□□□ -0.54
Sox17Q61473 AC132317.1-201ENSMUST00000227227 962 ntBASIC11.7□□□□□ -0.54
Sox17Q61473 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox17Q61473 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox17Q61473 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox17Q61473 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox17Q61473 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox17Q61473 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox17Q61473 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox17Q61473 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox17Q61473 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox17Q61473 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sox17Q61473 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Sox17Q61473 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox17Q61473 Gm15544-201ENSMUST00000118776 1531 ntBASIC11.7□□□□□ -0.54
Sox17Q61473 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox17Q61473 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sox17Q61473 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Sox17Q61473 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox17Q61473 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sox17Q61473 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Sox17Q61473 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox17Q61473 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox17Q61473 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sox17Q61473 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox17Q61473 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms