Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.22□□□□□ -0.45
Vsx2Q61412 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vsx2Q61412 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Vsx2Q61412 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vsx2Q61412 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.22□□□□□ -0.45
Vsx2Q61412 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vsx2Q61412 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.22□□□□□ -0.45
Vsx2Q61412 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Vsx2Q61412 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.22□□□□□ -0.45
Vsx2Q61412 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vsx2Q61412 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vsx2Q61412 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Vsx2Q61412 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Vsx2Q61412 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vsx2Q61412 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.22□□□□□ -0.45
Vsx2Q61412 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Vsx2Q61412 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vsx2Q61412 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Vsx2Q61412 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Vsx2Q61412 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Vsx2Q61412 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC12.21□□□□□ -0.45
Vsx2Q61412 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Vsx2Q61412 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vsx2Q61412 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Vsx2Q61412 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vsx2Q61412 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Vsx2Q61412 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.21□□□□□ -0.45
Vsx2Q61412 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Vsx2Q61412 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.21□□□□□ -0.45
Vsx2Q61412 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Vsx2Q61412 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.21□□□□□ -0.45
Vsx2Q61412 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.21□□□□□ -0.45
Vsx2Q61412 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
Vsx2Q61412 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vsx2Q61412 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Vsx2Q61412 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Vsx2Q61412 Gm6013-201ENSMUST00000212264 699 ntBASIC12.21□□□□□ -0.45
Vsx2Q61412 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Vsx2Q61412 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.21□□□□□ -0.45
Vsx2Q61412 CU024892.2-201ENSMUST00000224608 832 ntBASIC12.21□□□□□ -0.45
Vsx2Q61412 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vsx2Q61412 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC12.21□□□□□ -0.45
Vsx2Q61412 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vsx2Q61412 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.21□□□□□ -0.45
Vsx2Q61412 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Vsx2Q61412 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Vsx2Q61412 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Vsx2Q61412 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Vsx2Q61412 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Vsx2Q61412 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Vsx2Q61412 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Vsx2Q61412 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Vsx2Q61412 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Vsx2Q61412 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.46
Vsx2Q61412 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Vsx2Q61412 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Vsx2Q61412 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.21□□□□□ -0.46
Vsx2Q61412 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Vsx2Q61412 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Vsx2Q61412 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
Vsx2Q61412 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vsx2Q61412 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vsx2Q61412 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Vsx2Q61412 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
Vsx2Q61412 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vsx2Q61412 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.2□□□□□ -0.46
Vsx2Q61412 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vsx2Q61412 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vsx2Q61412 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Vsx2Q61412 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.2□□□□□ -0.46
Vsx2Q61412 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vsx2Q61412 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Vsx2Q61412 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.2□□□□□ -0.46
Vsx2Q61412 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vsx2Q61412 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Vsx2Q61412 Snord83b-201ENSMUST00000104546 94 ntBASIC12.2□□□□□ -0.46
Vsx2Q61412 Gm5940-201ENSMUST00000117582 1068 ntBASIC12.2□□□□□ -0.46
Vsx2Q61412 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC12.2□□□□□ -0.46
Vsx2Q61412 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Vsx2Q61412 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC12.2□□□□□ -0.46
Vsx2Q61412 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vsx2Q61412 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC12.2□□□□□ -0.46
Vsx2Q61412 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.2□□□□□ -0.46
Vsx2Q61412 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Vsx2Q61412 Gm3890-201ENSMUST00000182416 207 ntBASIC12.2□□□□□ -0.46
Vsx2Q61412 Gm43133-201ENSMUST00000197472 463 ntBASIC12.2□□□□□ -0.46
Vsx2Q61412 Gm8099-201ENSMUST00000200510 742 ntBASIC12.2□□□□□ -0.46
Vsx2Q61412 Gm18584-201ENSMUST00000203098 964 ntBASIC12.2□□□□□ -0.46
Vsx2Q61412 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Vsx2Q61412 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vsx2Q61412 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.2□□□□□ -0.46
Vsx2Q61412 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.2□□□□□ -0.46
Vsx2Q61412 Gm7399-201ENSMUST00000032395 858 ntBASIC12.2□□□□□ -0.46
Vsx2Q61412 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vsx2Q61412 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Vsx2Q61412 Gm8399-201ENSMUST00000082300 1117 ntBASIC12.2□□□□□ -0.46
Vsx2Q61412 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vsx2Q61412 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vsx2Q61412 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.2□□□□□ -0.46
Vsx2Q61412 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms