Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col12a1Q60847 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Col12a1Q60847 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Col12a1Q60847 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col12a1Q60847 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col12a1Q60847 Ighv7-1-201ENSMUST00000103474 363 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Col12a1Q60847 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col12a1Q60847 Mir7221-201ENSMUST00000184009 72 ntBASIC12.03□□□□□ -0.48
Col12a1Q60847 Gm29808-201ENSMUST00000194419 468 ntBASIC12.03□□□□□ -0.48
Col12a1Q60847 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col12a1Q60847 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col12a1Q60847 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col12a1Q60847 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Col12a1Q60847 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col12a1Q60847 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col12a1Q60847 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.03□□□□□ -0.48
Col12a1Q60847 Mrps23-201ENSMUST00000024486 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col12a1Q60847 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col12a1Q60847 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Col12a1Q60847 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.48
Col12a1Q60847 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Col12a1Q60847 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.48
Col12a1Q60847 Gm13351-201ENSMUST00000118087 414 ntBASIC12.02□□□□□ -0.48
Col12a1Q60847 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Col12a1Q60847 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Col12a1Q60847 Gm22379-201ENSMUST00000157480 131 ntBASIC12.02□□□□□ -0.48
Col12a1Q60847 7420461P10Rik-201ENSMUST00000169439 781 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Col12a1Q60847 Gm9884-201ENSMUST00000194343 1222 ntBASIC12.02□□□□□ -0.48
Col12a1Q60847 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Col12a1Q60847 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Col12a1Q60847 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Col12a1Q60847 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col12a1Q60847 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col12a1Q60847 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Col12a1Q60847 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Col12a1Q60847 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col12a1Q60847 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col12a1Q60847 Gm15506-201ENSMUST00000148776 1133 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Col12a1Q60847 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Col12a1Q60847 P4htm-204ENSMUST00000193621 1297 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Col12a1Q60847 AC142266.1-201ENSMUST00000228107 415 ntBASIC12.02□□□□□ -0.49
Col12a1Q60847 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col12a1Q60847 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col12a1Q60847 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col12a1Q60847 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col12a1Q60847 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Col12a1Q60847 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col12a1Q60847 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col12a1Q60847 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Col12a1Q60847 Gm9867-201ENSMUST00000192212 2647 ntBASIC12.02□□□□□ -0.49
Col12a1Q60847 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col12a1Q60847 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.02□□□□□ -0.49
Col12a1Q60847 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Col12a1Q60847 Gm14942-201ENSMUST00000119642 336 ntBASIC12.02□□□□□ -0.49
Col12a1Q60847 Gm10169-201ENSMUST00000121822 348 ntBASIC12.02□□□□□ -0.49
Col12a1Q60847 Gm34379-201ENSMUST00000195036 290 ntBASIC12.02□□□□□ -0.49
Col12a1Q60847 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Col12a1Q60847 Cdkn3-201ENSMUST00000067426 917 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col12a1Q60847 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col12a1Q60847 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.02□□□□□ -0.49
Col12a1Q60847 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col12a1Q60847 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Col12a1Q60847 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.01□□□□□ -0.49
Col12a1Q60847 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.01□□□□□ -0.49
Col12a1Q60847 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.01□□□□□ -0.49
Col12a1Q60847 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.01□□□□□ -0.49
Col12a1Q60847 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Col12a1Q60847 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Col12a1Q60847 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Col12a1Q60847 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col12a1Q60847 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col12a1Q60847 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col12a1Q60847 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Col12a1Q60847 Tnfrsf9-202ENSMUST00000060901 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col12a1Q60847 Olfr372-201ENSMUST00000093434 1016 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Col12a1Q60847 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC12.01□□□□□ -0.49
Col12a1Q60847 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.01□□□□□ -0.49
Col12a1Q60847 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Col12a1Q60847 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Col12a1Q60847 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Col12a1Q60847 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Col12a1Q60847 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col12a1Q60847 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col12a1Q60847 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col12a1Q60847 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col12a1Q60847 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col12a1Q60847 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Col12a1Q60847 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Col12a1Q60847 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Col12a1Q60847 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.01□□□□□ -0.49
Col12a1Q60847 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC12.01□□□□□ -0.49
Col12a1Q60847 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Col12a1Q60847 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC12.01□□□□□ -0.49
Col12a1Q60847 Gm45875-201ENSMUST00000212178 781 ntTSL 3 BASIC12.01□□□□□ -0.49
Col12a1Q60847 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col12a1Q60847 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Col12a1Q60847 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Col12a1Q60847 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Col12a1Q60847 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Col12a1Q60847 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms