Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Nr1h4Q60641 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nr1h4Q60641 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nr1h4Q60641 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nr1h4Q60641 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nr1h4Q60641 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nr1h4Q60641 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nr1h4Q60641 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nr1h4Q60641 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
Nr1h4Q60641 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Nr1h4Q60641 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nr1h4Q60641 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Nr1h4Q60641 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nr1h4Q60641 Gm11618-201ENSMUST00000117946 267 ntBASIC11.94□□□□□ -0.5
Nr1h4Q60641 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nr1h4Q60641 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC11.94□□□□□ -0.5
Nr1h4Q60641 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC11.94□□□□□ -0.5
Nr1h4Q60641 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nr1h4Q60641 Mir6392-201ENSMUST00000184924 108 ntBASIC11.94□□□□□ -0.5
Nr1h4Q60641 Gm7063-201ENSMUST00000186840 981 ntBASIC11.94□□□□□ -0.5
Nr1h4Q60641 Gm10576-201ENSMUST00000191927 825 ntBASIC11.94□□□□□ -0.5
Nr1h4Q60641 Gm37917-201ENSMUST00000194711 392 ntBASIC11.94□□□□□ -0.5
Nr1h4Q60641 Gm8099-201ENSMUST00000200510 742 ntBASIC11.94□□□□□ -0.5
Nr1h4Q60641 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nr1h4Q60641 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC11.94□□□□□ -0.5
Nr1h4Q60641 AC166051.1-201ENSMUST00000214313 210 ntBASIC11.94□□□□□ -0.5
Nr1h4Q60641 Gm18624-201ENSMUST00000220966 658 ntBASIC11.94□□□□□ -0.5
Nr1h4Q60641 AC238811.3-201ENSMUST00000225422 709 ntBASIC11.94□□□□□ -0.5
Nr1h4Q60641 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nr1h4Q60641 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nr1h4Q60641 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nr1h4Q60641 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Nr1h4Q60641 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC11.94□□□□□ -0.5
Nr1h4Q60641 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nr1h4Q60641 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nr1h4Q60641 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nr1h4Q60641 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nr1h4Q60641 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nr1h4Q60641 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nr1h4Q60641 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nr1h4Q60641 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nr1h4Q60641 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nr1h4Q60641 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nr1h4Q60641 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nr1h4Q60641 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Nr1h4Q60641 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nr1h4Q60641 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nr1h4Q60641 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nr1h4Q60641 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Nr1h4Q60641 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nr1h4Q60641 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC11.93□□□□□ -0.5
Nr1h4Q60641 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nr1h4Q60641 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nr1h4Q60641 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nr1h4Q60641 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nr1h4Q60641 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nr1h4Q60641 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Nr1h4Q60641 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.93□□□□□ -0.5
Nr1h4Q60641 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nr1h4Q60641 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nr1h4Q60641 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nr1h4Q60641 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nr1h4Q60641 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC11.93□□□□□ -0.5
Nr1h4Q60641 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nr1h4Q60641 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nr1h4Q60641 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC11.93□□□□□ -0.5
Nr1h4Q60641 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nr1h4Q60641 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nr1h4Q60641 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC11.93□□□□□ -0.5
Nr1h4Q60641 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nr1h4Q60641 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC11.93□□□□□ -0.5
Nr1h4Q60641 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC11.93□□□□□ -0.5
Nr1h4Q60641 Gm7446-201ENSMUST00000221035 1240 ntBASIC11.93□□□□□ -0.5
Nr1h4Q60641 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nr1h4Q60641 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nr1h4Q60641 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nr1h4Q60641 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nr1h4Q60641 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Nr1h4Q60641 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nr1h4Q60641 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nr1h4Q60641 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nr1h4Q60641 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nr1h4Q60641 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.93□□□□□ -0.5
Nr1h4Q60641 Gm18227-201ENSMUST00000211082 1468 ntBASIC11.93□□□□□ -0.5
Nr1h4Q60641 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nr1h4Q60641 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nr1h4Q60641 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nr1h4Q60641 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.93□□□□□ -0.5
Nr1h4Q60641 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nr1h4Q60641 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nr1h4Q60641 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nr1h4Q60641 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nr1h4Q60641 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC11.93□□□□□ -0.5
Nr1h4Q60641 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nr1h4Q60641 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nr1h4Q60641 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.93□□□□□ -0.5
Nr1h4Q60641 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Nr1h4Q60641 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nr1h4Q60641 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Nr1h4Q60641 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms