Protein–RNA interactions for Protein: Q60596

Xrcc1, DNA repair protein XRCC1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrcc1Q60596 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.99□□□□□ -0.49
Xrcc1Q60596 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Xrcc1Q60596 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Xrcc1Q60596 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
Xrcc1Q60596 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Xrcc1Q60596 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Xrcc1Q60596 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Xrcc1Q60596 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Xrcc1Q60596 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Xrcc1Q60596 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Xrcc1Q60596 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC11.98□□□□□ -0.49
Xrcc1Q60596 Gm19221-201ENSMUST00000221827 1477 ntBASIC11.98□□□□□ -0.49
Xrcc1Q60596 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.98□□□□□ -0.49
Xrcc1Q60596 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Xrcc1Q60596 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Xrcc1Q60596 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Xrcc1Q60596 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Xrcc1Q60596 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Xrcc1Q60596 Gm11597-201ENSMUST00000121423 964 ntBASIC11.98□□□□□ -0.49
Xrcc1Q60596 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Xrcc1Q60596 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC11.98□□□□□ -0.49
Xrcc1Q60596 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Xrcc1Q60596 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Xrcc1Q60596 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Xrcc1Q60596 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC11.98□□□□□ -0.49
Xrcc1Q60596 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Xrcc1Q60596 Gm3961-201ENSMUST00000204425 994 ntBASIC11.98□□□□□ -0.49
Xrcc1Q60596 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Xrcc1Q60596 Cts7-204ENSMUST00000225321 1257 ntBASIC11.98□□□□□ -0.49
Xrcc1Q60596 CT025533.2-201ENSMUST00000228715 1248 ntBASIC11.98□□□□□ -0.49
Xrcc1Q60596 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC11.98□□□□□ -0.49
Xrcc1Q60596 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Xrcc1Q60596 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Xrcc1Q60596 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC11.98□□□□□ -0.49
Xrcc1Q60596 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Xrcc1Q60596 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
Xrcc1Q60596 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Xrcc1Q60596 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Xrcc1Q60596 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Xrcc1Q60596 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Xrcc1Q60596 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Xrcc1Q60596 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Xrcc1Q60596 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Xrcc1Q60596 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Xrcc1Q60596 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Xrcc1Q60596 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Xrcc1Q60596 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC11.98□□□□□ -0.49
Xrcc1Q60596 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Xrcc1Q60596 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC11.98□□□□□ -0.49
Xrcc1Q60596 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Xrcc1Q60596 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Xrcc1Q60596 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Xrcc1Q60596 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Xrcc1Q60596 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Xrcc1Q60596 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Xrcc1Q60596 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Xrcc1Q60596 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Xrcc1Q60596 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Xrcc1Q60596 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Xrcc1Q60596 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Xrcc1Q60596 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Xrcc1Q60596 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Xrcc1Q60596 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Xrcc1Q60596 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Xrcc1Q60596 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Xrcc1Q60596 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Xrcc1Q60596 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Xrcc1Q60596 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Xrcc1Q60596 AC116503.1-201ENSMUST00000215445 2192 ntBASIC11.97□□□□□ -0.49
Xrcc1Q60596 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC11.97□□□□□ -0.49
Xrcc1Q60596 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Xrcc1Q60596 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Xrcc1Q60596 Gm13315-201ENSMUST00000120376 991 ntBASIC11.97□□□□□ -0.49
Xrcc1Q60596 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.97□□□□□ -0.49
Xrcc1Q60596 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC11.97□□□□□ -0.49
Xrcc1Q60596 Gm7895-201ENSMUST00000187459 1173 ntBASIC11.97□□□□□ -0.49
Xrcc1Q60596 Gm43822-201ENSMUST00000200285 476 ntBASIC11.97□□□□□ -0.49
Xrcc1Q60596 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Xrcc1Q60596 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Xrcc1Q60596 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Xrcc1Q60596 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC11.97□□□□□ -0.49
Xrcc1Q60596 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Xrcc1Q60596 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Xrcc1Q60596 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Xrcc1Q60596 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Xrcc1Q60596 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Xrcc1Q60596 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Xrcc1Q60596 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Xrcc1Q60596 AC167669.2-201ENSMUST00000224417 1620 ntBASIC11.97□□□□□ -0.49
Xrcc1Q60596 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Xrcc1Q60596 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC11.96□□□□□ -0.49
Xrcc1Q60596 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Xrcc1Q60596 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Xrcc1Q60596 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Xrcc1Q60596 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Xrcc1Q60596 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Xrcc1Q60596 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Xrcc1Q60596 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Xrcc1Q60596 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Xrcc1Q60596 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms