Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC10.75□□□□□ -0.69
Trav5d-4Q5R1F6 Gm8835-201ENSMUST00000173096 1169 ntBASIC10.75□□□□□ -0.69
Trav5d-4Q5R1F6 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC10.75□□□□□ -0.69
Trav5d-4Q5R1F6 Gm5745-201ENSMUST00000183748 313 ntBASIC10.75□□□□□ -0.69
Trav5d-4Q5R1F6 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav5d-4Q5R1F6 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC10.75□□□□□ -0.69
Trav5d-4Q5R1F6 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC10.75□□□□□ -0.69
Trav5d-4Q5R1F6 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC10.75□□□□□ -0.69
Trav5d-4Q5R1F6 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC10.75□□□□□ -0.69
Trav5d-4Q5R1F6 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC10.75□□□□□ -0.69
Trav5d-4Q5R1F6 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC10.75□□□□□ -0.69
Trav5d-4Q5R1F6 AC167013.1-201ENSMUST00000228592 202 ntBASIC10.75□□□□□ -0.69
Trav5d-4Q5R1F6 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav5d-4Q5R1F6 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav5d-4Q5R1F6 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav5d-4Q5R1F6 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav5d-4Q5R1F6 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav5d-4Q5R1F6 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav5d-4Q5R1F6 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav5d-4Q5R1F6 AC114008.2-201ENSMUST00000227699 1347 ntBASIC10.75□□□□□ -0.69
Trav5d-4Q5R1F6 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav5d-4Q5R1F6 Gm5620-201ENSMUST00000077991 1348 ntBASIC10.75□□□□□ -0.69
Trav5d-4Q5R1F6 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC10.75□□□□□ -0.69
Trav5d-4Q5R1F6 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Trav5d-4Q5R1F6 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav5d-4Q5R1F6 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav5d-4Q5R1F6 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav5d-4Q5R1F6 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Trav5d-4Q5R1F6 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav5d-4Q5R1F6 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav5d-4Q5R1F6 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Trav5d-4Q5R1F6 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Trav5d-4Q5R1F6 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC10.75□□□□□ -0.69
Trav5d-4Q5R1F6 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav5d-4Q5R1F6 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav5d-4Q5R1F6 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav5d-4Q5R1F6 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Trav5d-4Q5R1F6 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC10.74□□□□□ -0.69
Trav5d-4Q5R1F6 Gm27177-202ENSMUST00000183514 2703 ntBASIC10.74□□□□□ -0.69
Trav5d-4Q5R1F6 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav5d-4Q5R1F6 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC10.74□□□□□ -0.69
Trav5d-4Q5R1F6 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC10.74□□□□□ -0.69
Trav5d-4Q5R1F6 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Trav5d-4Q5R1F6 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav5d-4Q5R1F6 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav5d-4Q5R1F6 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav5d-4Q5R1F6 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC10.74□□□□□ -0.69
Trav5d-4Q5R1F6 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav5d-4Q5R1F6 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav5d-4Q5R1F6 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav5d-4Q5R1F6 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC10.74□□□□□ -0.69
Trav5d-4Q5R1F6 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav5d-4Q5R1F6 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC10.74□□□□□ -0.69
Trav5d-4Q5R1F6 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav5d-4Q5R1F6 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav5d-4Q5R1F6 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav5d-4Q5R1F6 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Trav5d-4Q5R1F6 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav5d-4Q5R1F6 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC10.74□□□□□ -0.69
Trav5d-4Q5R1F6 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav5d-4Q5R1F6 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav5d-4Q5R1F6 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav5d-4Q5R1F6 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Trav5d-4Q5R1F6 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Trav5d-4Q5R1F6 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav5d-4Q5R1F6 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC10.74□□□□□ -0.69
Trav5d-4Q5R1F6 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Trav5d-4Q5R1F6 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav5d-4Q5R1F6 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav5d-4Q5R1F6 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav5d-4Q5R1F6 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav5d-4Q5R1F6 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav5d-4Q5R1F6 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav5d-4Q5R1F6 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav5d-4Q5R1F6 Gm5780-201ENSMUST00000217774 1834 ntBASIC10.74□□□□□ -0.69
Trav5d-4Q5R1F6 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Trav5d-4Q5R1F6 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Trav5d-4Q5R1F6 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav5d-4Q5R1F6 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav5d-4Q5R1F6 Ptprm-203ENSMUST00000224091 3773 ntBASIC10.74□□□□□ -0.69
Trav5d-4Q5R1F6 Gm7553-201ENSMUST00000185805 1426 ntBASIC10.74□□□□□ -0.69
Trav5d-4Q5R1F6 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC10.74□□□□□ -0.69
Trav5d-4Q5R1F6 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC10.74□□□□□ -0.69
Trav5d-4Q5R1F6 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav5d-4Q5R1F6 Gm37827-201ENSMUST00000194486 1542 ntBASIC10.74□□□□□ -0.69
Trav5d-4Q5R1F6 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav5d-4Q5R1F6 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC10.73□□□□□ -0.69
Trav5d-4Q5R1F6 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav5d-4Q5R1F6 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC10.73□□□□□ -0.69
Trav5d-4Q5R1F6 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav5d-4Q5R1F6 Gm8228-201ENSMUST00000189949 2192 ntBASIC10.73□□□□□ -0.69
Trav5d-4Q5R1F6 Gm45743-201ENSMUST00000212701 2795 ntBASIC10.73□□□□□ -0.69
Trav5d-4Q5R1F6 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav5d-4Q5R1F6 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav5d-4Q5R1F6 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav5d-4Q5R1F6 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav5d-4Q5R1F6 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav5d-4Q5R1F6 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC10.73□□□□□ -0.69
Trav5d-4Q5R1F6 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav5d-4Q5R1F6 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms