Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.38□□□□□ -0.43
Scn2bQ56A07 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn2bQ56A07 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn2bQ56A07 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Scn2bQ56A07 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn2bQ56A07 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn2bQ56A07 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.38□□□□□ -0.43
Scn2bQ56A07 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn2bQ56A07 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Scn2bQ56A07 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.38□□□□□ -0.43
Scn2bQ56A07 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn2bQ56A07 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn2bQ56A07 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn2bQ56A07 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn2bQ56A07 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Scn2bQ56A07 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn2bQ56A07 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn2bQ56A07 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Scn2bQ56A07 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn2bQ56A07 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn2bQ56A07 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
Scn2bQ56A07 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.38□□□□□ -0.43
Scn2bQ56A07 Gm15703-201ENSMUST00000120250 880 ntBASIC12.38□□□□□ -0.43
Scn2bQ56A07 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.38□□□□□ -0.43
Scn2bQ56A07 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Scn2bQ56A07 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Scn2bQ56A07 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Scn2bQ56A07 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.38□□□□□ -0.43
Scn2bQ56A07 Gm29705-201ENSMUST00000212598 474 ntBASIC12.38□□□□□ -0.43
Scn2bQ56A07 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.38□□□□□ -0.43
Scn2bQ56A07 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.38□□□□□ -0.43
Scn2bQ56A07 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.38□□□□□ -0.43
Scn2bQ56A07 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn2bQ56A07 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn2bQ56A07 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Scn2bQ56A07 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Scn2bQ56A07 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn2bQ56A07 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn2bQ56A07 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn2bQ56A07 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn2bQ56A07 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.38□□□□□ -0.43
Scn2bQ56A07 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn2bQ56A07 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn2bQ56A07 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.38□□□□□ -0.43
Scn2bQ56A07 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.38□□□□□ -0.43
Scn2bQ56A07 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn2bQ56A07 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Scn2bQ56A07 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Scn2bQ56A07 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.38□□□□□ -0.43
Scn2bQ56A07 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn2bQ56A07 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scn2bQ56A07 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scn2bQ56A07 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scn2bQ56A07 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scn2bQ56A07 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Scn2bQ56A07 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scn2bQ56A07 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scn2bQ56A07 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.37□□□□□ -0.43
Scn2bQ56A07 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
Scn2bQ56A07 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Scn2bQ56A07 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scn2bQ56A07 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scn2bQ56A07 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.37□□□□□ -0.43
Scn2bQ56A07 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Scn2bQ56A07 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scn2bQ56A07 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
Scn2bQ56A07 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.37□□□□□ -0.43
Scn2bQ56A07 Gm27331-201ENSMUST00000183705 60 ntBASIC12.37□□□□□ -0.43
Scn2bQ56A07 Gm27390-201ENSMUST00000184516 176 ntBASIC12.37□□□□□ -0.43
Scn2bQ56A07 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Scn2bQ56A07 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.37□□□□□ -0.43
Scn2bQ56A07 Gm37042-201ENSMUST00000193816 581 ntBASIC12.37□□□□□ -0.43
Scn2bQ56A07 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.37□□□□□ -0.43
Scn2bQ56A07 Gm40466-201ENSMUST00000212174 422 ntBASIC12.37□□□□□ -0.43
Scn2bQ56A07 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.37□□□□□ -0.43
Scn2bQ56A07 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scn2bQ56A07 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Scn2bQ56A07 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scn2bQ56A07 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.37□□□□□ -0.43
Scn2bQ56A07 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scn2bQ56A07 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scn2bQ56A07 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scn2bQ56A07 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scn2bQ56A07 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Scn2bQ56A07 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Scn2bQ56A07 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.37□□□□□ -0.43
Scn2bQ56A07 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Scn2bQ56A07 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.37□□□□□ -0.43
Scn2bQ56A07 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Scn2bQ56A07 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scn2bQ56A07 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Scn2bQ56A07 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scn2bQ56A07 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scn2bQ56A07 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scn2bQ56A07 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scn2bQ56A07 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scn2bQ56A07 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Scn2bQ56A07 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scn2bQ56A07 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.36□□□□□ -0.43
Scn2bQ56A07 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms