Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Syne3Q4FZC9 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Syne3Q4FZC9 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Syne3Q4FZC9 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Syne3Q4FZC9 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Syne3Q4FZC9 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC13.31□□□□□ -0.28
Syne3Q4FZC9 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Syne3Q4FZC9 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Syne3Q4FZC9 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC13.31□□□□□ -0.28
Syne3Q4FZC9 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Syne3Q4FZC9 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Syne3Q4FZC9 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Syne3Q4FZC9 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC13.31□□□□□ -0.28
Syne3Q4FZC9 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC13.31□□□□□ -0.28
Syne3Q4FZC9 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Syne3Q4FZC9 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Syne3Q4FZC9 Gm22121-201ENSMUST00000175148 54 ntBASIC13.31□□□□□ -0.28
Syne3Q4FZC9 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Syne3Q4FZC9 Gm4935-201ENSMUST00000221316 1198 ntBASIC13.31□□□□□ -0.28
Syne3Q4FZC9 AC022775.2-201ENSMUST00000227885 646 ntBASIC13.31□□□□□ -0.28
Syne3Q4FZC9 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Syne3Q4FZC9 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Syne3Q4FZC9 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Syne3Q4FZC9 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Syne3Q4FZC9 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Syne3Q4FZC9 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Syne3Q4FZC9 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Syne3Q4FZC9 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Syne3Q4FZC9 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Syne3Q4FZC9 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Syne3Q4FZC9 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Syne3Q4FZC9 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Syne3Q4FZC9 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Syne3Q4FZC9 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Syne3Q4FZC9 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Syne3Q4FZC9 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Syne3Q4FZC9 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Syne3Q4FZC9 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Syne3Q4FZC9 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Syne3Q4FZC9 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Syne3Q4FZC9 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Syne3Q4FZC9 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC13.3□□□□□ -0.28
Syne3Q4FZC9 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Syne3Q4FZC9 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Syne3Q4FZC9 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Syne3Q4FZC9 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Syne3Q4FZC9 Gm7104-201ENSMUST00000179741 2532 ntBASIC13.3□□□□□ -0.28
Syne3Q4FZC9 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Syne3Q4FZC9 Paupar-201ENSMUST00000194826 3482 ntBASIC13.3□□□□□ -0.28
Syne3Q4FZC9 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC13.3□□□□□ -0.28
Syne3Q4FZC9 Gm14921-201ENSMUST00000118643 908 ntBASIC13.3□□□□□ -0.28
Syne3Q4FZC9 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC13.3□□□□□ -0.28
Syne3Q4FZC9 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC13.3□□□□□ -0.28
Syne3Q4FZC9 Gm17420-201ENSMUST00000164753 153 ntBASIC13.3□□□□□ -0.28
Syne3Q4FZC9 Gm37424-201ENSMUST00000191727 561 ntBASIC13.3□□□□□ -0.28
Syne3Q4FZC9 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Syne3Q4FZC9 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Syne3Q4FZC9 AC166051.1-201ENSMUST00000214313 210 ntBASIC13.3□□□□□ -0.28
Syne3Q4FZC9 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Syne3Q4FZC9 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Syne3Q4FZC9 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Syne3Q4FZC9 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC13.3□□□□□ -0.28
Syne3Q4FZC9 Snora73a-201ENSMUST00000082453 205 ntBASIC13.3□□□□□ -0.28
Syne3Q4FZC9 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Syne3Q4FZC9 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Syne3Q4FZC9 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Syne3Q4FZC9 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Syne3Q4FZC9 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Syne3Q4FZC9 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC13.3□□□□□ -0.28
Syne3Q4FZC9 Gm44942-201ENSMUST00000096093 2072 ntBASIC13.3□□□□□ -0.28
Syne3Q4FZC9 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Syne3Q4FZC9 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Syne3Q4FZC9 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Syne3Q4FZC9 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Syne3Q4FZC9 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Syne3Q4FZC9 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Syne3Q4FZC9 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Syne3Q4FZC9 Gm44775-201ENSMUST00000207266 1456 ntBASIC13.29□□□□□ -0.28
Syne3Q4FZC9 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Syne3Q4FZC9 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Syne3Q4FZC9 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Syne3Q4FZC9 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Syne3Q4FZC9 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Syne3Q4FZC9 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Syne3Q4FZC9 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Syne3Q4FZC9 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Syne3Q4FZC9 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Syne3Q4FZC9 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Syne3Q4FZC9 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Syne3Q4FZC9 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Syne3Q4FZC9 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Syne3Q4FZC9 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Syne3Q4FZC9 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC13.29□□□□□ -0.28
Syne3Q4FZC9 Gm27514-201ENSMUST00000183692 110 ntBASIC13.29□□□□□ -0.28
Syne3Q4FZC9 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC13.29□□□□□ -0.28
Syne3Q4FZC9 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Syne3Q4FZC9 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC13.29□□□□□ -0.28
Syne3Q4FZC9 Gm37008-201ENSMUST00000195712 319 ntBASIC13.29□□□□□ -0.28
Syne3Q4FZC9 Gm18916-201ENSMUST00000198264 1246 ntBASIC13.29□□□□□ -0.28
Syne3Q4FZC9 Gm18584-201ENSMUST00000203098 964 ntBASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms