Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim80Q3V061 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim80Q3V061 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim80Q3V061 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim80Q3V061 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trim80Q3V061 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.97□□□□□ -0.33
Trim80Q3V061 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.97□□□□□ -0.33
Trim80Q3V061 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim80Q3V061 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim80Q3V061 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim80Q3V061 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim80Q3V061 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim80Q3V061 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.97□□□□□ -0.33
Trim80Q3V061 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim80Q3V061 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim80Q3V061 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
Trim80Q3V061 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim80Q3V061 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.97□□□□□ -0.33
Trim80Q3V061 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim80Q3V061 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.97□□□□□ -0.33
Trim80Q3V061 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim80Q3V061 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim80Q3V061 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
Trim80Q3V061 Gm12537-201ENSMUST00000119266 1002 ntBASIC12.97□□□□□ -0.33
Trim80Q3V061 Gm11524-201ENSMUST00000119349 807 ntBASIC12.97□□□□□ -0.33
Trim80Q3V061 Gm12070-201ENSMUST00000119551 1002 ntBASIC12.97□□□□□ -0.33
Trim80Q3V061 Gm12671-201ENSMUST00000119978 1002 ntBASIC12.97□□□□□ -0.33
Trim80Q3V061 Gm13292-201ENSMUST00000120014 1000 ntBASIC12.97□□□□□ -0.33
Trim80Q3V061 Gm12403-201ENSMUST00000121384 959 ntBASIC12.97□□□□□ -0.33
Trim80Q3V061 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim80Q3V061 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.97□□□□□ -0.33
Trim80Q3V061 Gm15429-201ENSMUST00000151268 798 ntBASIC12.97□□□□□ -0.33
Trim80Q3V061 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.97□□□□□ -0.33
Trim80Q3V061 Gm17420-201ENSMUST00000164753 153 ntBASIC12.97□□□□□ -0.33
Trim80Q3V061 Gm10359-201ENSMUST00000180167 1002 ntBASIC12.97□□□□□ -0.33
Trim80Q3V061 Gm12033-201ENSMUST00000180654 1002 ntBASIC12.97□□□□□ -0.33
Trim80Q3V061 Gm5559-201ENSMUST00000180755 1002 ntBASIC12.97□□□□□ -0.33
Trim80Q3V061 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.97□□□□□ -0.33
Trim80Q3V061 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.97□□□□□ -0.33
Trim80Q3V061 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC12.97□□□□□ -0.33
Trim80Q3V061 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim80Q3V061 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trim80Q3V061 Gm10478-201ENSMUST00000084451 396 ntBASIC12.97□□□□□ -0.33
Trim80Q3V061 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim80Q3V061 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Trim80Q3V061 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim80Q3V061 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Trim80Q3V061 Gm43102-201ENSMUST00000201004 2324 ntBASIC12.97□□□□□ -0.33
Trim80Q3V061 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim80Q3V061 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim80Q3V061 Daam2-202ENSMUST00000224595 1926 ntBASIC12.97□□□□□ -0.33
Trim80Q3V061 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim80Q3V061 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim80Q3V061 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.97□□□□□ -0.33
Trim80Q3V061 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim80Q3V061 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim80Q3V061 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim80Q3V061 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim80Q3V061 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim80Q3V061 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim80Q3V061 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Trim80Q3V061 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim80Q3V061 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim80Q3V061 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.96□□□□□ -0.33
Trim80Q3V061 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.96□□□□□ -0.33
Trim80Q3V061 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim80Q3V061 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim80Q3V061 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim80Q3V061 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim80Q3V061 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Trim80Q3V061 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim80Q3V061 Gm38037-201ENSMUST00000192600 1624 ntBASIC12.96□□□□□ -0.33
Trim80Q3V061 Gm6211-201ENSMUST00000147973 4275 ntBASIC12.96□□□□□ -0.33
Trim80Q3V061 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim80Q3V061 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim80Q3V061 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim80Q3V061 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim80Q3V061 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim80Q3V061 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim80Q3V061 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC12.96□□□□□ -0.33
Trim80Q3V061 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.96□□□□□ -0.33
Trim80Q3V061 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim80Q3V061 Gm17330-201ENSMUST00000221047 165 ntBASIC12.96□□□□□ -0.33
Trim80Q3V061 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.96□□□□□ -0.33
Trim80Q3V061 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.96□□□□□ -0.33
Trim80Q3V061 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim80Q3V061 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim80Q3V061 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.96□□□□□ -0.33
Trim80Q3V061 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC12.96□□□□□ -0.33
Trim80Q3V061 Gm37015-201ENSMUST00000192763 1521 ntBASIC12.96□□□□□ -0.33
Trim80Q3V061 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim80Q3V061 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Trim80Q3V061 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim80Q3V061 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
Trim80Q3V061 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim80Q3V061 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim80Q3V061 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim80Q3V061 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
Trim80Q3V061 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim80Q3V061 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms