Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trim40Q3UWA4 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trim40Q3UWA4 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Trim40Q3UWA4 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC11.74□□□□□ -0.53
Trim40Q3UWA4 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim40Q3UWA4 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim40Q3UWA4 Gm43868-201ENSMUST00000205187 2114 ntBASIC11.74□□□□□ -0.53
Trim40Q3UWA4 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Trim40Q3UWA4 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.74□□□□□ -0.53
Trim40Q3UWA4 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Trim40Q3UWA4 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim40Q3UWA4 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim40Q3UWA4 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim40Q3UWA4 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Trim40Q3UWA4 Gm15487-201ENSMUST00000122373 465 ntBASIC11.74□□□□□ -0.53
Trim40Q3UWA4 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC11.74□□□□□ -0.53
Trim40Q3UWA4 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trim40Q3UWA4 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim40Q3UWA4 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trim40Q3UWA4 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC11.74□□□□□ -0.53
Trim40Q3UWA4 Gm44872-201ENSMUST00000207864 420 ntBASIC11.74□□□□□ -0.53
Trim40Q3UWA4 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim40Q3UWA4 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim40Q3UWA4 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim40Q3UWA4 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trim40Q3UWA4 Gm6263-201ENSMUST00000120029 1342 ntBASIC11.74□□□□□ -0.53
Trim40Q3UWA4 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.74□□□□□ -0.53
Trim40Q3UWA4 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim40Q3UWA4 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC11.74□□□□□ -0.53
Trim40Q3UWA4 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC11.74□□□□□ -0.53
Trim40Q3UWA4 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trim40Q3UWA4 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim40Q3UWA4 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim40Q3UWA4 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim40Q3UWA4 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim40Q3UWA4 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim40Q3UWA4 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Trim40Q3UWA4 Gm14132-201ENSMUST00000117188 1719 ntBASIC11.74□□□□□ -0.53
Trim40Q3UWA4 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Trim40Q3UWA4 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC11.74□□□□□ -0.53
Trim40Q3UWA4 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.74□□□□□ -0.53
Trim40Q3UWA4 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim40Q3UWA4 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC11.74□□□□□ -0.53
Trim40Q3UWA4 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim40Q3UWA4 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
Trim40Q3UWA4 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim40Q3UWA4 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trim40Q3UWA4 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim40Q3UWA4 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim40Q3UWA4 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trim40Q3UWA4 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim40Q3UWA4 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trim40Q3UWA4 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim40Q3UWA4 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim40Q3UWA4 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim40Q3UWA4 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trim40Q3UWA4 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim40Q3UWA4 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim40Q3UWA4 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim40Q3UWA4 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim40Q3UWA4 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim40Q3UWA4 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim40Q3UWA4 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trim40Q3UWA4 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trim40Q3UWA4 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC11.73□□□□□ -0.53
Trim40Q3UWA4 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Trim40Q3UWA4 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trim40Q3UWA4 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trim40Q3UWA4 Gm12291-201ENSMUST00000121627 311 ntBASIC11.73□□□□□ -0.53
Trim40Q3UWA4 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC11.73□□□□□ -0.53
Trim40Q3UWA4 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trim40Q3UWA4 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Trim40Q3UWA4 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim40Q3UWA4 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim40Q3UWA4 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim40Q3UWA4 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim40Q3UWA4 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC11.73□□□□□ -0.53
Trim40Q3UWA4 Gm24694-201ENSMUST00000180054 110 ntBASIC11.73□□□□□ -0.53
Trim40Q3UWA4 Gm27663-201ENSMUST00000184839 110 ntBASIC11.73□□□□□ -0.53
Trim40Q3UWA4 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim40Q3UWA4 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trim40Q3UWA4 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
Trim40Q3UWA4 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trim40Q3UWA4 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC11.73□□□□□ -0.53
Trim40Q3UWA4 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trim40Q3UWA4 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC11.73□□□□□ -0.53
Trim40Q3UWA4 AC173210.1-201ENSMUST00000222341 1131 ntBASIC11.73□□□□□ -0.53
Trim40Q3UWA4 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim40Q3UWA4 Abhd6-203ENSMUST00000225234 1958 ntBASIC11.73□□□□□ -0.53
Trim40Q3UWA4 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim40Q3UWA4 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Trim40Q3UWA4 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim40Q3UWA4 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim40Q3UWA4 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Trim40Q3UWA4 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim40Q3UWA4 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim40Q3UWA4 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim40Q3UWA4 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trim40Q3UWA4 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim40Q3UWA4 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms