Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Gm6430-201ENSMUST00000054664 1248 ntBASIC12.58□□□□□ -0.4
Fam196aQ3USH1 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Fam196aQ3USH1 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.58□□□□□ -0.4
Fam196aQ3USH1 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Fam196aQ3USH1 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Fam196aQ3USH1 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Fam196aQ3USH1 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Fam196aQ3USH1 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Fam196aQ3USH1 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.57□□□□□ -0.4
Fam196aQ3USH1 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Fam196aQ3USH1 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Fam196aQ3USH1 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Fam196aQ3USH1 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Fam196aQ3USH1 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Fam196aQ3USH1 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Fam196aQ3USH1 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.57□□□□□ -0.4
Fam196aQ3USH1 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Fam196aQ3USH1 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Fam196aQ3USH1 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Fam196aQ3USH1 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Fam196aQ3USH1 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Fam196aQ3USH1 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Fam196aQ3USH1 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Fam196aQ3USH1 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Fam196aQ3USH1 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Fam196aQ3USH1 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Fam196aQ3USH1 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Fam196aQ3USH1 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Fam196aQ3USH1 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Fam196aQ3USH1 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Fam196aQ3USH1 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC12.57□□□□□ -0.4
Fam196aQ3USH1 Gm5455-201ENSMUST00000058710 715 ntBASIC12.57□□□□□ -0.4
Fam196aQ3USH1 Gm9785-201ENSMUST00000062642 1006 ntBASIC12.57□□□□□ -0.4
Fam196aQ3USH1 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Fam196aQ3USH1 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Fam196aQ3USH1 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Fam196aQ3USH1 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Fam196aQ3USH1 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Fam196aQ3USH1 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Fam196aQ3USH1 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.57□□□□□ -0.4
Fam196aQ3USH1 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Fam196aQ3USH1 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.57□□□□□ -0.4
Fam196aQ3USH1 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Fam196aQ3USH1 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Fam196aQ3USH1 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Fam196aQ3USH1 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Fam196aQ3USH1 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Fam196aQ3USH1 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Fam196aQ3USH1 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Fam196aQ3USH1 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Fam196aQ3USH1 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Fam196aQ3USH1 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Fam196aQ3USH1 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Fam196aQ3USH1 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Fam196aQ3USH1 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Fam196aQ3USH1 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
Fam196aQ3USH1 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Fam196aQ3USH1 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Fam196aQ3USH1 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Fam196aQ3USH1 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Fam196aQ3USH1 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.56□□□□□ -0.4
Fam196aQ3USH1 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Fam196aQ3USH1 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Fam196aQ3USH1 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Fam196aQ3USH1 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Fam196aQ3USH1 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Fam196aQ3USH1 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Fam196aQ3USH1 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Fam196aQ3USH1 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Fam196aQ3USH1 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Fam196aQ3USH1 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Fam196aQ3USH1 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Fam196aQ3USH1 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Fam196aQ3USH1 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Fam196aQ3USH1 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC12.56□□□□□ -0.4
Fam196aQ3USH1 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC12.56□□□□□ -0.4
Fam196aQ3USH1 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC12.56□□□□□ -0.4
Fam196aQ3USH1 Gm27530-201ENSMUST00000184096 98 ntBASIC12.56□□□□□ -0.4
Fam196aQ3USH1 Gm9645-201ENSMUST00000197131 792 ntBASIC12.56□□□□□ -0.4
Fam196aQ3USH1 Gm44329-201ENSMUST00000197469 112 ntBASIC12.56□□□□□ -0.4
Fam196aQ3USH1 Gm4157-201ENSMUST00000211647 679 ntBASIC12.56□□□□□ -0.4
Fam196aQ3USH1 Olfr1347-205ENSMUST00000220413 964 ntBASIC12.56□□□□□ -0.4
Fam196aQ3USH1 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Fam196aQ3USH1 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Fam196aQ3USH1 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Fam196aQ3USH1 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Fam196aQ3USH1 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Fam196aQ3USH1 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Fam196aQ3USH1 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Fam196aQ3USH1 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Fam196aQ3USH1 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Fam196aQ3USH1 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Fam196aQ3USH1 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Fam196aQ3USH1 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Fam196aQ3USH1 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.56□□□□□ -0.4
Fam196aQ3USH1 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Fam196aQ3USH1 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Fam196aQ3USH1 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Fam196aQ3USH1 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Fam196aQ3USH1 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms