Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC10.86□□□□□ -0.67
Shisa3Q3UPR0 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Shisa3Q3UPR0 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Shisa3Q3UPR0 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Shisa3Q3UPR0 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Shisa3Q3UPR0 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Shisa3Q3UPR0 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Shisa3Q3UPR0 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Shisa3Q3UPR0 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Shisa3Q3UPR0 0610040B10Rik-203ENSMUST00000198455 1643 ntBASIC10.86□□□□□ -0.67
Shisa3Q3UPR0 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Shisa3Q3UPR0 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC10.86□□□□□ -0.67
Shisa3Q3UPR0 AC126257.2-201ENSMUST00000215507 2300 ntBASIC10.86□□□□□ -0.67
Shisa3Q3UPR0 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Shisa3Q3UPR0 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Shisa3Q3UPR0 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Shisa3Q3UPR0 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Shisa3Q3UPR0 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Shisa3Q3UPR0 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Shisa3Q3UPR0 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Shisa3Q3UPR0 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC10.86□□□□□ -0.67
Shisa3Q3UPR0 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Shisa3Q3UPR0 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Shisa3Q3UPR0 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Shisa3Q3UPR0 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Shisa3Q3UPR0 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Shisa3Q3UPR0 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
Shisa3Q3UPR0 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Shisa3Q3UPR0 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Shisa3Q3UPR0 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Shisa3Q3UPR0 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Shisa3Q3UPR0 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Shisa3Q3UPR0 Gm16342-201ENSMUST00000124025 1025 ntBASIC10.85□□□□□ -0.67
Shisa3Q3UPR0 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC10.85□□□□□ -0.67
Shisa3Q3UPR0 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Shisa3Q3UPR0 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Shisa3Q3UPR0 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Shisa3Q3UPR0 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Shisa3Q3UPR0 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC10.85□□□□□ -0.67
Shisa3Q3UPR0 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC10.85□□□□□ -0.67
Shisa3Q3UPR0 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC10.85□□□□□ -0.67
Shisa3Q3UPR0 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Shisa3Q3UPR0 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Shisa3Q3UPR0 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Shisa3Q3UPR0 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Shisa3Q3UPR0 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Shisa3Q3UPR0 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Shisa3Q3UPR0 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC10.85□□□□□ -0.67
Shisa3Q3UPR0 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Shisa3Q3UPR0 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Shisa3Q3UPR0 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Shisa3Q3UPR0 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC10.85□□□□□ -0.67
Shisa3Q3UPR0 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Shisa3Q3UPR0 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Shisa3Q3UPR0 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Shisa3Q3UPR0 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Shisa3Q3UPR0 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Shisa3Q3UPR0 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Shisa3Q3UPR0 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Shisa3Q3UPR0 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Shisa3Q3UPR0 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
Shisa3Q3UPR0 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Shisa3Q3UPR0 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Shisa3Q3UPR0 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC10.84□□□□□ -0.67
Shisa3Q3UPR0 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Shisa3Q3UPR0 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Shisa3Q3UPR0 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Shisa3Q3UPR0 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Shisa3Q3UPR0 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Shisa3Q3UPR0 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Shisa3Q3UPR0 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC10.84□□□□□ -0.67
Shisa3Q3UPR0 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Shisa3Q3UPR0 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Shisa3Q3UPR0 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Shisa3Q3UPR0 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC10.84□□□□□ -0.67
Shisa3Q3UPR0 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Shisa3Q3UPR0 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Shisa3Q3UPR0 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC10.84□□□□□ -0.67
Shisa3Q3UPR0 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC10.84□□□□□ -0.67
Shisa3Q3UPR0 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC10.84□□□□□ -0.67
Shisa3Q3UPR0 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC10.84□□□□□ -0.67
Shisa3Q3UPR0 Gm15429-201ENSMUST00000151268 798 ntBASIC10.84□□□□□ -0.67
Shisa3Q3UPR0 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Shisa3Q3UPR0 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Shisa3Q3UPR0 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Shisa3Q3UPR0 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Shisa3Q3UPR0 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Shisa3Q3UPR0 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC10.84□□□□□ -0.67
Shisa3Q3UPR0 Gm18916-201ENSMUST00000198264 1246 ntBASIC10.84□□□□□ -0.67
Shisa3Q3UPR0 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC10.84□□□□□ -0.67
Shisa3Q3UPR0 Gm44985-201ENSMUST00000206202 1016 ntBASIC10.84□□□□□ -0.67
Shisa3Q3UPR0 Gm45696-201ENSMUST00000212088 985 ntBASIC10.84□□□□□ -0.67
Shisa3Q3UPR0 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC10.84□□□□□ -0.67
Shisa3Q3UPR0 AC150560.1-201ENSMUST00000227731 1187 ntBASIC10.84□□□□□ -0.67
Shisa3Q3UPR0 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Shisa3Q3UPR0 Rn7sk-201ENSMUST00000083103 331 ntBASIC10.84□□□□□ -0.67
Shisa3Q3UPR0 Gm26315-201ENSMUST00000083890 321 ntBASIC10.84□□□□□ -0.67
Shisa3Q3UPR0 Gm10478-201ENSMUST00000084451 396 ntBASIC10.84□□□□□ -0.67
Shisa3Q3UPR0 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Shisa3Q3UPR0 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms