Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox4Q06831 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.32□□□□□ -0.44
Sox4Q06831 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Sox4Q06831 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sox4Q06831 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sox4Q06831 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox4Q06831 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox4Q06831 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox4Q06831 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox4Q06831 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox4Q06831 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Sox4Q06831 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox4Q06831 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sox4Q06831 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox4Q06831 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC12.32□□□□□ -0.44
Sox4Q06831 Gm13350-201ENSMUST00000120519 479 ntBASIC12.32□□□□□ -0.44
Sox4Q06831 Gm14999-201ENSMUST00000121039 624 ntBASIC12.32□□□□□ -0.44
Sox4Q06831 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.32□□□□□ -0.44
Sox4Q06831 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC12.32□□□□□ -0.44
Sox4Q06831 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sox4Q06831 Gm27023-201ENSMUST00000182372 285 ntBASIC12.32□□□□□ -0.44
Sox4Q06831 Gm9022-201ENSMUST00000182482 992 ntBASIC12.32□□□□□ -0.44
Sox4Q06831 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox4Q06831 Gm7118-201ENSMUST00000200167 1003 ntBASIC12.32□□□□□ -0.44
Sox4Q06831 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox4Q06831 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox4Q06831 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Sox4Q06831 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12.32□□□□□ -0.44
Sox4Q06831 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Sox4Q06831 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
Sox4Q06831 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox4Q06831 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox4Q06831 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox4Q06831 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Sox4Q06831 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox4Q06831 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox4Q06831 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.32□□□□□ -0.44
Sox4Q06831 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox4Q06831 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox4Q06831 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox4Q06831 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox4Q06831 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Sox4Q06831 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sox4Q06831 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sox4Q06831 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox4Q06831 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox4Q06831 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox4Q06831 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox4Q06831 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sox4Q06831 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sox4Q06831 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.31□□□□□ -0.44
Sox4Q06831 Gm11222-201ENSMUST00000119005 738 ntBASIC12.31□□□□□ -0.44
Sox4Q06831 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox4Q06831 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sox4Q06831 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sox4Q06831 Gm21769-201ENSMUST00000211922 111 ntBASIC12.31□□□□□ -0.44
Sox4Q06831 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox4Q06831 Gm10076-201ENSMUST00000073238 384 ntBASIC12.31□□□□□ -0.44
Sox4Q06831 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sox4Q06831 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.31□□□□□ -0.44
Sox4Q06831 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.31□□□□□ -0.44
Sox4Q06831 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox4Q06831 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox4Q06831 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox4Q06831 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC12.31□□□□□ -0.44
Sox4Q06831 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox4Q06831 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox4Q06831 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox4Q06831 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox4Q06831 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sox4Q06831 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sox4Q06831 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox4Q06831 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox4Q06831 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox4Q06831 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Sox4Q06831 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox4Q06831 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox4Q06831 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox4Q06831 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox4Q06831 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox4Q06831 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox4Q06831 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox4Q06831 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sox4Q06831 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox4Q06831 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox4Q06831 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox4Q06831 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC12.3□□□□□ -0.44
Sox4Q06831 Gm12314-201ENSMUST00000118104 538 ntBASIC12.3□□□□□ -0.44
Sox4Q06831 Gm14760-201ENSMUST00000121831 999 ntBASIC12.3□□□□□ -0.44
Sox4Q06831 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC12.3□□□□□ -0.44
Sox4Q06831 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox4Q06831 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.3□□□□□ -0.44
Sox4Q06831 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox4Q06831 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.3□□□□□ -0.44
Sox4Q06831 AC122371.3-201ENSMUST00000223402 1061 ntBASIC12.3□□□□□ -0.44
Sox4Q06831 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox4Q06831 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Sox4Q06831 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Sox4Q06831 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sox4Q06831 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms