Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox9Q04887 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox9Q04887 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Sox9Q04887 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.93□□□□□ -0.34
Sox9Q04887 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox9Q04887 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sox9Q04887 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sox9Q04887 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox9Q04887 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox9Q04887 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox9Q04887 Gm13384-201ENSMUST00000117166 1344 ntBASIC12.93□□□□□ -0.34
Sox9Q04887 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sox9Q04887 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox9Q04887 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox9Q04887 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox9Q04887 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox9Q04887 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox9Q04887 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.93□□□□□ -0.34
Sox9Q04887 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.93□□□□□ -0.34
Sox9Q04887 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox9Q04887 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sox9Q04887 Gm13809-201ENSMUST00000117921 597 ntBASIC12.93□□□□□ -0.34
Sox9Q04887 Gm12314-201ENSMUST00000118104 538 ntBASIC12.93□□□□□ -0.34
Sox9Q04887 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC12.93□□□□□ -0.34
Sox9Q04887 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sox9Q04887 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC12.93□□□□□ -0.34
Sox9Q04887 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.93□□□□□ -0.34
Sox9Q04887 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC12.93□□□□□ -0.34
Sox9Q04887 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sox9Q04887 Ighv4-2-201ENSMUST00000192975 362 ntBASIC12.93□□□□□ -0.34
Sox9Q04887 Gm42779-201ENSMUST00000198807 406 ntBASIC12.93□□□□□ -0.34
Sox9Q04887 Gm43778-201ENSMUST00000199438 199 ntBASIC12.93□□□□□ -0.34
Sox9Q04887 Gm45909-201ENSMUST00000212413 1031 ntBASIC12.93□□□□□ -0.34
Sox9Q04887 Gm807-202ENSMUST00000224929 408 ntBASIC12.93□□□□□ -0.34
Sox9Q04887 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox9Q04887 Gm26448-201ENSMUST00000082446 203 ntBASIC12.93□□□□□ -0.34
Sox9Q04887 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox9Q04887 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox9Q04887 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox9Q04887 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sox9Q04887 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sox9Q04887 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox9Q04887 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sox9Q04887 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sox9Q04887 Gm37660-201ENSMUST00000192754 1732 ntBASIC12.93□□□□□ -0.34
Sox9Q04887 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
Sox9Q04887 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox9Q04887 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox9Q04887 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox9Q04887 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox9Q04887 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox9Q04887 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.92□□□□□ -0.34
Sox9Q04887 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox9Q04887 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Sox9Q04887 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox9Q04887 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.92□□□□□ -0.34
Sox9Q04887 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Sox9Q04887 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC12.92□□□□□ -0.34
Sox9Q04887 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC12.92□□□□□ -0.34
Sox9Q04887 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Sox9Q04887 Gm45120-201ENSMUST00000208880 408 ntBASIC12.92□□□□□ -0.34
Sox9Q04887 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Sox9Q04887 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.92□□□□□ -0.34
Sox9Q04887 AC166341.2-201ENSMUST00000220571 120 ntBASIC12.92□□□□□ -0.34
Sox9Q04887 AC154252.2-201ENSMUST00000223593 767 ntBASIC12.92□□□□□ -0.34
Sox9Q04887 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox9Q04887 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Sox9Q04887 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox9Q04887 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox9Q04887 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Sox9Q04887 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.92□□□□□ -0.34
Sox9Q04887 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Sox9Q04887 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox9Q04887 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox9Q04887 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sox9Q04887 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox9Q04887 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox9Q04887 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.91□□□□□ -0.34
Sox9Q04887 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox9Q04887 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox9Q04887 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sox9Q04887 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sox9Q04887 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox9Q04887 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Sox9Q04887 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.91□□□□□ -0.34
Sox9Q04887 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox9Q04887 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC12.91□□□□□ -0.34
Sox9Q04887 Gm1848-201ENSMUST00000120711 789 ntBASIC12.91□□□□□ -0.34
Sox9Q04887 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.91□□□□□ -0.34
Sox9Q04887 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sox9Q04887 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox9Q04887 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox9Q04887 Gm8100-201ENSMUST00000182906 988 ntBASIC12.91□□□□□ -0.34
Sox9Q04887 Mir7221-201ENSMUST00000184009 72 ntBASIC12.91□□□□□ -0.34
Sox9Q04887 Gm3332-201ENSMUST00000189337 928 ntBASIC12.91□□□□□ -0.34
Sox9Q04887 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sox9Q04887 Gm44552-201ENSMUST00000205458 1247 ntBASIC12.91□□□□□ -0.34
Sox9Q04887 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC12.91□□□□□ -0.34
Sox9Q04887 Gm19640-201ENSMUST00000214849 464 ntBASIC12.91□□□□□ -0.34
Sox9Q04887 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms