Protein–RNA interactions for Protein: Q01705

Notch1, Neurogenic locus notch homolog protein 1, mousemouse

Predictions only

Length 2,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch1Q01705 Gm43416-201ENSMUST00000201916 1015 ntBASIC9.04□□□□□ -0.96
Notch1Q01705 Gm17831-201ENSMUST00000205579 900 ntBASIC9.04□□□□□ -0.96
Notch1Q01705 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC9.04□□□□□ -0.96
Notch1Q01705 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
Notch1Q01705 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Notch1Q01705 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Notch1Q01705 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
Notch1Q01705 AC158355.1-201ENSMUST00000215895 1705 ntBASIC9.04□□□□□ -0.96
Notch1Q01705 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Notch1Q01705 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC9.04□□□□□ -0.96
Notch1Q01705 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Notch1Q01705 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Notch1Q01705 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Notch1Q01705 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC9.04□□□□□ -0.96
Notch1Q01705 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Notch1Q01705 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Notch1Q01705 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC9.04□□□□□ -0.96
Notch1Q01705 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Notch1Q01705 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Notch1Q01705 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Notch1Q01705 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Notch1Q01705 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Notch1Q01705 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Notch1Q01705 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
Notch1Q01705 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Notch1Q01705 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Notch1Q01705 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Notch1Q01705 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Notch1Q01705 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Notch1Q01705 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
Notch1Q01705 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
Notch1Q01705 Gm13142-201ENSMUST00000117213 1453 ntBASIC9.04□□□□□ -0.96
Notch1Q01705 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Notch1Q01705 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Notch1Q01705 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Notch1Q01705 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Notch1Q01705 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Notch1Q01705 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC9.04□□□□□ -0.96
Notch1Q01705 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC9.04□□□□□ -0.96
Notch1Q01705 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC9.04□□□□□ -0.96
Notch1Q01705 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Notch1Q01705 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Notch1Q01705 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC9.04□□□□□ -0.96
Notch1Q01705 Gm42682-201ENSMUST00000198349 1265 ntBASIC9.04□□□□□ -0.96
Notch1Q01705 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Notch1Q01705 Gm3793-201ENSMUST00000204973 672 ntBASIC9.04□□□□□ -0.96
Notch1Q01705 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC9.04□□□□□ -0.96
Notch1Q01705 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC9.04□□□□□ -0.96
Notch1Q01705 Gm9111-201ENSMUST00000219394 709 ntBASIC9.04□□□□□ -0.96
Notch1Q01705 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Notch1Q01705 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Notch1Q01705 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Notch1Q01705 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Notch1Q01705 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Notch1Q01705 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
Notch1Q01705 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Notch1Q01705 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Notch1Q01705 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Notch1Q01705 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Notch1Q01705 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
Notch1Q01705 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Notch1Q01705 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Notch1Q01705 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Notch1Q01705 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Notch1Q01705 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Notch1Q01705 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Notch1Q01705 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC9.03□□□□□ -0.96
Notch1Q01705 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Notch1Q01705 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC9.03□□□□□ -0.96
Notch1Q01705 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC9.03□□□□□ -0.96
Notch1Q01705 Gm23363-201ENSMUST00000175024 79 ntBASIC9.03□□□□□ -0.96
Notch1Q01705 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Notch1Q01705 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Notch1Q01705 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Notch1Q01705 Gm43778-201ENSMUST00000199438 199 ntBASIC9.03□□□□□ -0.96
Notch1Q01705 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC9.03□□□□□ -0.96
Notch1Q01705 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Notch1Q01705 Gm13384-201ENSMUST00000117166 1344 ntBASIC9.03□□□□□ -0.96
Notch1Q01705 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Notch1Q01705 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
Notch1Q01705 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Notch1Q01705 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Notch1Q01705 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Notch1Q01705 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Notch1Q01705 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Notch1Q01705 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Notch1Q01705 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Notch1Q01705 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Notch1Q01705 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Notch1Q01705 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Notch1Q01705 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Notch1Q01705 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Notch1Q01705 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC9.03□□□□□ -0.96
Notch1Q01705 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Notch1Q01705 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
Notch1Q01705 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Notch1Q01705 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC9.03□□□□□ -0.96
Notch1Q01705 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Notch1Q01705 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Notch1Q01705 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC9.03□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms