Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cacna1aP97445 Gm45120-201ENSMUST00000208880 408 ntBASIC11.57□□□□□ -0.56
Cacna1aP97445 Gm8768-201ENSMUST00000220020 826 ntBASIC11.57□□□□□ -0.56
Cacna1aP97445 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC11.57□□□□□ -0.56
Cacna1aP97445 Gm1821-202ENSMUST00000227415 750 ntBASIC11.57□□□□□ -0.56
Cacna1aP97445 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cacna1aP97445 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC11.57□□□□□ -0.56
Cacna1aP97445 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cacna1aP97445 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cacna1aP97445 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cacna1aP97445 AC154747.3-201ENSMUST00000224471 3470 ntBASIC11.57□□□□□ -0.56
Cacna1aP97445 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cacna1aP97445 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cacna1aP97445 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cacna1aP97445 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cacna1aP97445 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cacna1aP97445 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cacna1aP97445 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cacna1aP97445 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cacna1aP97445 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cacna1aP97445 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cacna1aP97445 Gm14644-201ENSMUST00000116671 647 ntBASIC11.56□□□□□ -0.56
Cacna1aP97445 Gm9062-201ENSMUST00000117712 727 ntBASIC11.56□□□□□ -0.56
Cacna1aP97445 Gm11980-201ENSMUST00000121445 986 ntBASIC11.56□□□□□ -0.56
Cacna1aP97445 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cacna1aP97445 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cacna1aP97445 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cacna1aP97445 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC11.56□□□□□ -0.56
Cacna1aP97445 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC11.56□□□□□ -0.56
Cacna1aP97445 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC11.56□□□□□ -0.56
Cacna1aP97445 AC107638.1-201ENSMUST00000213690 1061 ntBASIC11.56□□□□□ -0.56
Cacna1aP97445 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC11.56□□□□□ -0.56
Cacna1aP97445 CT009713.8-201ENSMUST00000225448 560 ntBASIC11.56□□□□□ -0.56
Cacna1aP97445 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cacna1aP97445 Gm6781-201ENSMUST00000038304 1242 ntBASIC11.56□□□□□ -0.56
Cacna1aP97445 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cacna1aP97445 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cacna1aP97445 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cacna1aP97445 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cacna1aP97445 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Cacna1aP97445 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Cacna1aP97445 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cacna1aP97445 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cacna1aP97445 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cacna1aP97445 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cacna1aP97445 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Cacna1aP97445 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC11.56□□□□□ -0.56
Cacna1aP97445 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Cacna1aP97445 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cacna1aP97445 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Cacna1aP97445 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cacna1aP97445 AC123619.2-202ENSMUST00000225097 1568 ntBASIC11.56□□□□□ -0.56
Cacna1aP97445 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cacna1aP97445 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC11.56□□□□□ -0.56
Cacna1aP97445 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Cacna1aP97445 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cacna1aP97445 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cacna1aP97445 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cacna1aP97445 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cacna1aP97445 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cacna1aP97445 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cacna1aP97445 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cacna1aP97445 Gm12266-201ENSMUST00000120311 962 ntBASIC11.56□□□□□ -0.56
Cacna1aP97445 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cacna1aP97445 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC11.56□□□□□ -0.56
Cacna1aP97445 Ighv1-86-201ENSMUST00000200562 353 ntBASIC11.56□□□□□ -0.56
Cacna1aP97445 Gm21027-201ENSMUST00000219300 1236 ntBASIC11.56□□□□□ -0.56
Cacna1aP97445 CT030637.1-201ENSMUST00000228016 669 ntBASIC11.56□□□□□ -0.56
Cacna1aP97445 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cacna1aP97445 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC11.56□□□□□ -0.56
Cacna1aP97445 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Cacna1aP97445 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC11.56□□□□□ -0.56
Cacna1aP97445 Gm2420-202ENSMUST00000202224 2249 ntBASIC11.56□□□□□ -0.56
Cacna1aP97445 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cacna1aP97445 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cacna1aP97445 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Cacna1aP97445 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cacna1aP97445 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cacna1aP97445 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cacna1aP97445 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cacna1aP97445 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cacna1aP97445 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cacna1aP97445 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Cacna1aP97445 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Cacna1aP97445 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cacna1aP97445 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cacna1aP97445 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cacna1aP97445 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cacna1aP97445 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cacna1aP97445 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC11.55□□□□□ -0.56
Cacna1aP97445 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cacna1aP97445 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cacna1aP97445 Mir3060-201ENSMUST00000175339 83 ntBASIC11.55□□□□□ -0.56
Cacna1aP97445 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Cacna1aP97445 Gm27627-201ENSMUST00000183644 150 ntBASIC11.55□□□□□ -0.56
Cacna1aP97445 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cacna1aP97445 Ly6e-207ENSMUST00000187606 735 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Cacna1aP97445 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cacna1aP97445 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cacna1aP97445 AC165260.3-202ENSMUST00000224550 1031 ntBASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms