Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
SgcbP82349 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SgcbP82349 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SgcbP82349 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SgcbP82349 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC11.2□□□□□ -0.62
SgcbP82349 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SgcbP82349 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SgcbP82349 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SgcbP82349 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
SgcbP82349 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
SgcbP82349 Gm19221-201ENSMUST00000221827 1477 ntBASIC11.19□□□□□ -0.62
SgcbP82349 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC11.19□□□□□ -0.62
SgcbP82349 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
SgcbP82349 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SgcbP82349 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC11.19□□□□□ -0.62
SgcbP82349 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
SgcbP82349 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SgcbP82349 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SgcbP82349 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
SgcbP82349 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SgcbP82349 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
SgcbP82349 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SgcbP82349 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC11.19□□□□□ -0.62
SgcbP82349 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC11.19□□□□□ -0.62
SgcbP82349 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
SgcbP82349 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SgcbP82349 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
SgcbP82349 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
SgcbP82349 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
SgcbP82349 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
SgcbP82349 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
SgcbP82349 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
SgcbP82349 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
SgcbP82349 Gm2991-201ENSMUST00000173338 480 ntBASIC11.19□□□□□ -0.62
SgcbP82349 Gm26956-201ENSMUST00000182176 986 ntBASIC11.19□□□□□ -0.62
SgcbP82349 Gm27023-201ENSMUST00000182372 285 ntBASIC11.19□□□□□ -0.62
SgcbP82349 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC11.19□□□□□ -0.62
SgcbP82349 Gm42863-201ENSMUST00000197875 2958 ntBASIC11.19□□□□□ -0.62
SgcbP82349 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC11.19□□□□□ -0.62
SgcbP82349 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.19□□□□□ -0.62
SgcbP82349 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC11.19□□□□□ -0.62
SgcbP82349 Morn2-202ENSMUST00000227729 656 ntBASIC11.19□□□□□ -0.62
SgcbP82349 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SgcbP82349 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
SgcbP82349 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SgcbP82349 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
SgcbP82349 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
SgcbP82349 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.19□□□□□ -0.62
SgcbP82349 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SgcbP82349 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SgcbP82349 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC11.19□□□□□ -0.62
SgcbP82349 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC11.19□□□□□ -0.62
SgcbP82349 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SgcbP82349 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
SgcbP82349 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SgcbP82349 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
SgcbP82349 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
SgcbP82349 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
SgcbP82349 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SgcbP82349 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
SgcbP82349 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
SgcbP82349 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC11.19□□□□□ -0.62
SgcbP82349 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC11.19□□□□□ -0.62
SgcbP82349 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SgcbP82349 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SgcbP82349 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SgcbP82349 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
SgcbP82349 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SgcbP82349 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SgcbP82349 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SgcbP82349 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC11.18□□□□□ -0.62
SgcbP82349 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
SgcbP82349 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC11.18□□□□□ -0.62
SgcbP82349 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
SgcbP82349 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC11.18□□□□□ -0.62
SgcbP82349 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC11.18□□□□□ -0.62
SgcbP82349 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC11.18□□□□□ -0.62
SgcbP82349 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SgcbP82349 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SgcbP82349 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SgcbP82349 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
SgcbP82349 Gm13342-201ENSMUST00000121055 207 ntBASIC11.18□□□□□ -0.62
SgcbP82349 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
SgcbP82349 Gm13316-201ENSMUST00000140537 691 ntBASIC11.18□□□□□ -0.62
SgcbP82349 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC11.18□□□□□ -0.62
SgcbP82349 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC11.18□□□□□ -0.62
SgcbP82349 Gm15904-201ENSMUST00000154515 487 ntTSL 3 BASIC11.18□□□□□ -0.62
SgcbP82349 Rmrp-201ENSMUST00000157463 271 ntBASIC11.18□□□□□ -0.62
SgcbP82349 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC11.18□□□□□ -0.62
SgcbP82349 Gm6334-201ENSMUST00000207083 228 ntBASIC11.18□□□□□ -0.62
SgcbP82349 AC159246.1-201ENSMUST00000214478 249 ntBASIC11.18□□□□□ -0.62
SgcbP82349 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.18□□□□□ -0.62
SgcbP82349 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
SgcbP82349 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
SgcbP82349 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
SgcbP82349 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC11.18□□□□□ -0.62
SgcbP82349 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC11.18□□□□□ -0.62
SgcbP82349 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
SgcbP82349 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SgcbP82349 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 78.1 ms