Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Shox2P70390 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shox2P70390 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shox2P70390 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shox2P70390 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shox2P70390 AC166359.1-201ENSMUST00000220243 1871 ntBASIC12.34□□□□□ -0.43
Shox2P70390 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shox2P70390 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Shox2P70390 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Shox2P70390 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Shox2P70390 Gm43522-201ENSMUST00000196697 1922 ntBASIC12.33□□□□□ -0.44
Shox2P70390 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Shox2P70390 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Shox2P70390 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Shox2P70390 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC12.33□□□□□ -0.44
Shox2P70390 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Shox2P70390 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Shox2P70390 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Shox2P70390 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Shox2P70390 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.33□□□□□ -0.44
Shox2P70390 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Shox2P70390 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Shox2P70390 Gm25911-201ENSMUST00000157621 56 ntBASIC12.33□□□□□ -0.44
Shox2P70390 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Shox2P70390 Gm25927-201ENSMUST00000175058 117 ntBASIC12.33□□□□□ -0.44
Shox2P70390 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Shox2P70390 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC12.33□□□□□ -0.44
Shox2P70390 Rbfox2-208ENSMUST00000227930 1218 ntBASIC12.33□□□□□ -0.44
Shox2P70390 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
Shox2P70390 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.33□□□□□ -0.44
Shox2P70390 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Shox2P70390 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Shox2P70390 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Shox2P70390 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Shox2P70390 Gm43860-201ENSMUST00000201742 2705 ntBASIC12.33□□□□□ -0.44
Shox2P70390 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Shox2P70390 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Shox2P70390 Gm10548-201ENSMUST00000097631 2629 ntBASIC12.33□□□□□ -0.44
Shox2P70390 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Shox2P70390 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.33□□□□□ -0.44
Shox2P70390 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Shox2P70390 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Shox2P70390 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Shox2P70390 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Shox2P70390 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Shox2P70390 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Shox2P70390 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Shox2P70390 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Shox2P70390 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Shox2P70390 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.32□□□□□ -0.44
Shox2P70390 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Shox2P70390 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Shox2P70390 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Shox2P70390 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Shox2P70390 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Shox2P70390 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Shox2P70390 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Shox2P70390 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Shox2P70390 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Shox2P70390 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Shox2P70390 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Shox2P70390 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Shox2P70390 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Shox2P70390 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Shox2P70390 Gm4875-201ENSMUST00000118257 786 ntBASIC12.32□□□□□ -0.44
Shox2P70390 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.32□□□□□ -0.44
Shox2P70390 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Shox2P70390 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Shox2P70390 Gm28693-202ENSMUST00000190758 331 ntBASIC12.32□□□□□ -0.44
Shox2P70390 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Shox2P70390 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Shox2P70390 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Shox2P70390 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.32□□□□□ -0.44
Shox2P70390 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Shox2P70390 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Shox2P70390 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Shox2P70390 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Shox2P70390 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Shox2P70390 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Shox2P70390 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Shox2P70390 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC12.32□□□□□ -0.44
Shox2P70390 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.32□□□□□ -0.44
Shox2P70390 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC12.32□□□□□ -0.44
Shox2P70390 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Shox2P70390 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Shox2P70390 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Shox2P70390 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Shox2P70390 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Shox2P70390 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Shox2P70390 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.31□□□□□ -0.44
Shox2P70390 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC12.31□□□□□ -0.44
Shox2P70390 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Shox2P70390 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Shox2P70390 AC108858.2-201ENSMUST00000228186 1425 ntBASIC12.31□□□□□ -0.44
Shox2P70390 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Shox2P70390 AC093022.4-203ENSMUST00000228523 2657 ntBASIC12.31□□□□□ -0.44
Shox2P70390 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Shox2P70390 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Shox2P70390 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC12.31□□□□□ -0.44
Shox2P70390 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms